Protein–RNA interactions for Protein: O88689

Pcdha4, Protocadherin alpha-4, mousemouse

Predictions only

Length 947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha4O88689 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha4O88689 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha4O88689 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha4O88689 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha4O88689 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha4O88689 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha4O88689 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha4O88689 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha4O88689 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.71■□□□□ 0.75
Pcdha4O88689 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
Pcdha4O88689 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha4O88689 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Pcdha4O88689 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Pcdha4O88689 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha4O88689 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.71■□□□□ 0.75
Pcdha4O88689 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha4O88689 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha4O88689 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha4O88689 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha4O88689 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha4O88689 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha4O88689 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha4O88689 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha4O88689 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha4O88689 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha4O88689 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha4O88689 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha4O88689 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha4O88689 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha4O88689 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha4O88689 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.7■□□□□ 0.74
Pcdha4O88689 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha4O88689 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.7■□□□□ 0.74
Pcdha4O88689 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Pcdha4O88689 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha4O88689 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Pcdha4O88689 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Pcdha4O88689 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha4O88689 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Pcdha4O88689 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha4O88689 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha4O88689 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha4O88689 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha4O88689 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha4O88689 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha4O88689 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha4O88689 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.69■□□□□ 0.74
Pcdha4O88689 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha4O88689 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha4O88689 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.69■□□□□ 0.74
Pcdha4O88689 Mir8112-201ENSMUST00000184382 131 ntBASIC19.69■□□□□ 0.74
Pcdha4O88689 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.69■□□□□ 0.74
Pcdha4O88689 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.69■□□□□ 0.74
Pcdha4O88689 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Pcdha4O88689 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha4O88689 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Pcdha4O88689 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha4O88689 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Pcdha4O88689 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Pcdha4O88689 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha4O88689 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha4O88689 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Pcdha4O88689 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdha4O88689 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Pcdha4O88689 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha4O88689 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha4O88689 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha4O88689 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha4O88689 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Pcdha4O88689 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdha4O88689 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha4O88689 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha4O88689 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Pcdha4O88689 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
Pcdha4O88689 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha4O88689 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Pcdha4O88689 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.67■□□□□ 0.74
Pcdha4O88689 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdha4O88689 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.67■□□□□ 0.74
Pcdha4O88689 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.67■□□□□ 0.74
Pcdha4O88689 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha4O88689 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha4O88689 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha4O88689 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha4O88689 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha4O88689 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Pcdha4O88689 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdha4O88689 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha4O88689 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdha4O88689 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha4O88689 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Pcdha4O88689 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.66■□□□□ 0.74
Pcdha4O88689 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Pcdha4O88689 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdha4O88689 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha4O88689 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha4O88689 Mir5122-201ENSMUST00000175004 89 ntBASIC19.66■□□□□ 0.74
Pcdha4O88689 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.66■□□□□ 0.74
Pcdha4O88689 Gm10252-201ENSMUST00000209541 832 ntBASIC19.66■□□□□ 0.74
Pcdha4O88689 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms