Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.2■□□□□ 0.82
Becn1O88597 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Becn1O88597 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.2■□□□□ 0.82
Becn1O88597 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Becn1O88597 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Becn1O88597 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Becn1O88597 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Becn1O88597 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Becn1O88597 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Becn1O88597 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Becn1O88597 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Becn1O88597 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Becn1O88597 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Becn1O88597 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Becn1O88597 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Becn1O88597 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.2■□□□□ 0.82
Becn1O88597 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Becn1O88597 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Becn1O88597 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Becn1O88597 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Becn1O88597 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Becn1O88597 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.19■□□□□ 0.82
Becn1O88597 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.19■□□□□ 0.82
Becn1O88597 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Becn1O88597 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Becn1O88597 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Becn1O88597 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.19■□□□□ 0.82
Becn1O88597 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Becn1O88597 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Becn1O88597 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.19■□□□□ 0.82
Becn1O88597 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Becn1O88597 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Becn1O88597 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Becn1O88597 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Becn1O88597 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Becn1O88597 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Becn1O88597 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Becn1O88597 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Becn1O88597 Gm20628-201ENSMUST00000177363 3215 ntBASIC20.18■□□□□ 0.82
Becn1O88597 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Becn1O88597 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Becn1O88597 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.18■□□□□ 0.82
Becn1O88597 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Becn1O88597 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Becn1O88597 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Becn1O88597 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Becn1O88597 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Becn1O88597 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Becn1O88597 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Becn1O88597 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Becn1O88597 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Becn1O88597 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Becn1O88597 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Becn1O88597 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Becn1O88597 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Becn1O88597 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Becn1O88597 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Becn1O88597 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Becn1O88597 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Becn1O88597 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Becn1O88597 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.16■□□□□ 0.82
Becn1O88597 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.16■□□□□ 0.82
Becn1O88597 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Becn1O88597 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.16■□□□□ 0.82
Becn1O88597 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Becn1O88597 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.16■□□□□ 0.82
Becn1O88597 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Becn1O88597 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Becn1O88597 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Becn1O88597 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Becn1O88597 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Becn1O88597 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Becn1O88597 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Becn1O88597 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.15■□□□□ 0.82
Becn1O88597 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Becn1O88597 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Becn1O88597 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.15■□□□□ 0.82
Becn1O88597 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Becn1O88597 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
Becn1O88597 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Becn1O88597 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Becn1O88597 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Becn1O88597 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
Becn1O88597 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Becn1O88597 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Becn1O88597 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Becn1O88597 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Becn1O88597 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Becn1O88597 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.14■□□□□ 0.81
Becn1O88597 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Becn1O88597 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.14■□□□□ 0.81
Becn1O88597 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.14■□□□□ 0.81
Becn1O88597 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Becn1O88597 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Becn1O88597 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Becn1O88597 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Becn1O88597 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Becn1O88597 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Becn1O88597 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Becn1O88597 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms