Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf17O88472 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf17O88472 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Tnfrsf17O88472 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf17O88472 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf17O88472 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Tnfrsf17O88472 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf17O88472 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf17O88472 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Tnfrsf17O88472 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf17O88472 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf17O88472 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.38■□□□□ 0.21
Tnfrsf17O88472 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Tnfrsf17O88472 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf17O88472 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf17O88472 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.38■□□□□ 0.21
Tnfrsf17O88472 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf17O88472 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf17O88472 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf17O88472 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.37■□□□□ 0.21
Tnfrsf17O88472 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Tnfrsf17O88472 Gm11452-201ENSMUST00000122376 690 ntBASIC16.37■□□□□ 0.21
Tnfrsf17O88472 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf17O88472 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Tnfrsf17O88472 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf17O88472 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Tnfrsf17O88472 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf17O88472 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf17O88472 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf17O88472 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf17O88472 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf17O88472 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.36■□□□□ 0.21
Tnfrsf17O88472 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf17O88472 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf17O88472 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Tnfrsf17O88472 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf17O88472 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf17O88472 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Tnfrsf17O88472 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf17O88472 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf17O88472 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf17O88472 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Tnfrsf17O88472 Gm18195-201ENSMUST00000207604 706 ntBASIC16.36■□□□□ 0.21
Tnfrsf17O88472 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf17O88472 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.36■□□□□ 0.21
Tnfrsf17O88472 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Tnfrsf17O88472 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf17O88472 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf17O88472 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf17O88472 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf17O88472 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf17O88472 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Tnfrsf17O88472 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnfrsf17O88472 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnfrsf17O88472 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnfrsf17O88472 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnfrsf17O88472 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tnfrsf17O88472 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.35■□□□□ 0.21
Tnfrsf17O88472 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.35■□□□□ 0.21
Tnfrsf17O88472 Gm10566-201ENSMUST00000086739 996 ntBASIC16.35■□□□□ 0.21
Tnfrsf17O88472 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.35■□□□□ 0.21
Tnfrsf17O88472 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tnfrsf17O88472 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnfrsf17O88472 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Tnfrsf17O88472 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnfrsf17O88472 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.34■□□□□ 0.21
Tnfrsf17O88472 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnfrsf17O88472 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnfrsf17O88472 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnfrsf17O88472 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.34■□□□□ 0.21
Tnfrsf17O88472 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.34■□□□□ 0.21
Tnfrsf17O88472 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnfrsf17O88472 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnfrsf17O88472 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnfrsf17O88472 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnfrsf17O88472 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnfrsf17O88472 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Tnfrsf17O88472 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tnfrsf17O88472 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tnfrsf17O88472 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tnfrsf17O88472 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf17O88472 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf17O88472 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Tnfrsf17O88472 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.33■□□□□ 0.2
Tnfrsf17O88472 Gm37722-201ENSMUST00000193757 208 ntBASIC16.33■□□□□ 0.2
Tnfrsf17O88472 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf17O88472 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.33■□□□□ 0.2
Tnfrsf17O88472 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Tnfrsf17O88472 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf17O88472 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Tnfrsf17O88472 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf17O88472 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Tnfrsf17O88472 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Tnfrsf17O88472 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Tnfrsf17O88472 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Tnfrsf17O88472 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Tnfrsf17O88472 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf17O88472 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf17O88472 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf17O88472 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms