Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna1hO88427 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Cacna1hO88427 Gm11779-201ENSMUST00000118541 368 ntBASIC17.22■□□□□ 0.35
Cacna1hO88427 Gm24841-201ENSMUST00000158676 357 ntBASIC17.22■□□□□ 0.35
Cacna1hO88427 Mir5131-201ENSMUST00000175426 93 ntBASIC17.22■□□□□ 0.35
Cacna1hO88427 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.22■□□□□ 0.35
Cacna1hO88427 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.22■□□□□ 0.35
Cacna1hO88427 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1hO88427 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1hO88427 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1hO88427 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1hO88427 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1hO88427 Gm14057-201ENSMUST00000120631 482 ntBASIC17.21■□□□□ 0.35
Cacna1hO88427 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.21■□□□□ 0.35
Cacna1hO88427 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1hO88427 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.21■□□□□ 0.35
Cacna1hO88427 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1hO88427 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Cacna1hO88427 Gm6376-201ENSMUST00000209407 580 ntBASIC17.21■□□□□ 0.34
Cacna1hO88427 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cacna1hO88427 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cacna1hO88427 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1hO88427 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1hO88427 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1hO88427 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1hO88427 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1hO88427 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1hO88427 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1hO88427 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.2■□□□□ 0.34
Cacna1hO88427 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.2■□□□□ 0.34
Cacna1hO88427 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1hO88427 Gm9731-201ENSMUST00000209480 747 ntBASIC17.2■□□□□ 0.34
Cacna1hO88427 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.2■□□□□ 0.34
Cacna1hO88427 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1hO88427 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cacna1hO88427 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1hO88427 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1hO88427 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1hO88427 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1hO88427 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.2■□□□□ 0.34
Cacna1hO88427 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.2■□□□□ 0.34
Cacna1hO88427 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1hO88427 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.2■□□□□ 0.34
Cacna1hO88427 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1hO88427 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.2■□□□□ 0.34
Cacna1hO88427 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.19■□□□□ 0.34
Cacna1hO88427 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Cacna1hO88427 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna1hO88427 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna1hO88427 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna1hO88427 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna1hO88427 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cacna1hO88427 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Cacna1hO88427 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.19■□□□□ 0.34
Cacna1hO88427 Gm10175-201ENSMUST00000086013 645 ntBASIC17.19■□□□□ 0.34
Cacna1hO88427 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna1hO88427 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.19■□□□□ 0.34
Cacna1hO88427 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna1hO88427 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cacna1hO88427 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna1hO88427 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna1hO88427 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna1hO88427 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Cacna1hO88427 Gm14822-201ENSMUST00000122247 291 ntBASIC17.18■□□□□ 0.34
Cacna1hO88427 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cacna1hO88427 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.18■□□□□ 0.34
Cacna1hO88427 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cacna1hO88427 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cacna1hO88427 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cacna1hO88427 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cacna1hO88427 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cacna1hO88427 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cacna1hO88427 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cacna1hO88427 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cacna1hO88427 Gm8097-201ENSMUST00000117903 829 ntBASIC17.18■□□□□ 0.34
Cacna1hO88427 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cacna1hO88427 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.18■□□□□ 0.34
Cacna1hO88427 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Cacna1hO88427 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cacna1hO88427 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1hO88427 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.17■□□□□ 0.34
Cacna1hO88427 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cacna1hO88427 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Cacna1hO88427 Psmb5-202ENSMUST00000227257 622 ntBASIC17.17■□□□□ 0.34
Cacna1hO88427 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1hO88427 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cacna1hO88427 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cacna1hO88427 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1hO88427 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1hO88427 Gm15920-201ENSMUST00000118998 402 ntBASIC17.17■□□□□ 0.34
Cacna1hO88427 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
Cacna1hO88427 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Cacna1hO88427 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Cacna1hO88427 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cacna1hO88427 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1hO88427 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1hO88427 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1hO88427 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1hO88427 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1hO88427 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms