Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tgfbr3O88393 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tgfbr3O88393 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tgfbr3O88393 Gm21559-201ENSMUST00000220638 855 ntBASIC16.77■□□□□ 0.28
Tgfbr3O88393 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tgfbr3O88393 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tgfbr3O88393 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tgfbr3O88393 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tgfbr3O88393 Gm8587-201ENSMUST00000076538 843 ntBASIC16.77■□□□□ 0.28
Tgfbr3O88393 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tgfbr3O88393 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tgfbr3O88393 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Tgfbr3O88393 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Tgfbr3O88393 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tgfbr3O88393 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tgfbr3O88393 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
Tgfbr3O88393 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfbr3O88393 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Tgfbr3O88393 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.76■□□□□ 0.27
Tgfbr3O88393 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfbr3O88393 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfbr3O88393 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.76■□□□□ 0.27
Tgfbr3O88393 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Tgfbr3O88393 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfbr3O88393 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfbr3O88393 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfbr3O88393 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfbr3O88393 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfbr3O88393 Tgds-204ENSMUST00000228543 1594 ntBASIC16.76■□□□□ 0.27
Tgfbr3O88393 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfbr3O88393 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Tgfbr3O88393 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfbr3O88393 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfbr3O88393 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Tgfbr3O88393 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfbr3O88393 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfbr3O88393 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Tgfbr3O88393 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.75■□□□□ 0.27
Tgfbr3O88393 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfbr3O88393 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.75■□□□□ 0.27
Tgfbr3O88393 Gm27389-201ENSMUST00000183622 195 ntBASIC16.75■□□□□ 0.27
Tgfbr3O88393 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.75■□□□□ 0.27
Tgfbr3O88393 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfbr3O88393 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfbr3O88393 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Tgfbr3O88393 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfbr3O88393 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfbr3O88393 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Tgfbr3O88393 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfbr3O88393 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfbr3O88393 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfbr3O88393 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfbr3O88393 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfbr3O88393 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfbr3O88393 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfbr3O88393 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.74■□□□□ 0.27
Tgfbr3O88393 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Tgfbr3O88393 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.74■□□□□ 0.27
Tgfbr3O88393 Gm29791-202ENSMUST00000207888 369 ntBASIC16.74■□□□□ 0.27
Tgfbr3O88393 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfbr3O88393 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.74■□□□□ 0.27
Tgfbr3O88393 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.74■□□□□ 0.27
Tgfbr3O88393 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfbr3O88393 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
Tgfbr3O88393 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfbr3O88393 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Tgfbr3O88393 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Tgfbr3O88393 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfbr3O88393 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Tgfbr3O88393 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfbr3O88393 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.73■□□□□ 0.27
Tgfbr3O88393 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Tgfbr3O88393 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Tgfbr3O88393 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.73■□□□□ 0.27
Tgfbr3O88393 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfbr3O88393 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfbr3O88393 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfbr3O88393 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfbr3O88393 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfbr3O88393 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfbr3O88393 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfbr3O88393 Gm5587-201ENSMUST00000206270 674 ntBASIC16.73■□□□□ 0.27
Tgfbr3O88393 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfbr3O88393 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfbr3O88393 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfbr3O88393 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.73■□□□□ 0.27
Tgfbr3O88393 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfbr3O88393 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfbr3O88393 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.73■□□□□ 0.27
Tgfbr3O88393 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.73■□□□□ 0.27
Tgfbr3O88393 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfbr3O88393 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfbr3O88393 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfbr3O88393 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
Tgfbr3O88393 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Tgfbr3O88393 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.72■□□□□ 0.27
Tgfbr3O88393 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfbr3O88393 Mir1668-201ENSMUST00000184114 107 ntBASIC16.72■□□□□ 0.27
Tgfbr3O88393 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfbr3O88393 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms