Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim1O70400 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim1O70400 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim1O70400 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.4■□□□□ 0.38
Pdlim1O70400 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim1O70400 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim1O70400 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim1O70400 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim1O70400 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim1O70400 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pdlim1O70400 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim1O70400 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.4■□□□□ 0.38
Pdlim1O70400 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim1O70400 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.4■□□□□ 0.38
Pdlim1O70400 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.4■□□□□ 0.38
Pdlim1O70400 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim1O70400 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.4■□□□□ 0.38
Pdlim1O70400 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim1O70400 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim1O70400 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.4■□□□□ 0.38
Pdlim1O70400 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.38
Pdlim1O70400 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Pdlim1O70400 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.39■□□□□ 0.38
Pdlim1O70400 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Pdlim1O70400 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim1O70400 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim1O70400 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim1O70400 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim1O70400 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim1O70400 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim1O70400 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim1O70400 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim1O70400 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.39■□□□□ 0.37
Pdlim1O70400 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim1O70400 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim1O70400 Gm4974-201ENSMUST00000209974 875 ntBASIC17.39■□□□□ 0.37
Pdlim1O70400 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim1O70400 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim1O70400 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim1O70400 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.39■□□□□ 0.37
Pdlim1O70400 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.39■□□□□ 0.37
Pdlim1O70400 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Pdlim1O70400 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim1O70400 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim1O70400 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.39■□□□□ 0.37
Pdlim1O70400 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim1O70400 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim1O70400 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.39■□□□□ 0.37
Pdlim1O70400 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim1O70400 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pdlim1O70400 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim1O70400 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim1O70400 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim1O70400 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim1O70400 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim1O70400 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim1O70400 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim1O70400 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.38■□□□□ 0.37
Pdlim1O70400 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pdlim1O70400 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim1O70400 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim1O70400 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pdlim1O70400 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Pdlim1O70400 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim1O70400 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim1O70400 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.38■□□□□ 0.37
Pdlim1O70400 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim1O70400 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim1O70400 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pdlim1O70400 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim1O70400 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.37■□□□□ 0.37
Pdlim1O70400 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.37■□□□□ 0.37
Pdlim1O70400 Gm10517-202ENSMUST00000192970 758 ntBASIC17.37■□□□□ 0.37
Pdlim1O70400 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim1O70400 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.37■□□□□ 0.37
Pdlim1O70400 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim1O70400 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.37■□□□□ 0.37
Pdlim1O70400 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pdlim1O70400 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pdlim1O70400 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.37■□□□□ 0.37
Pdlim1O70400 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.37■□□□□ 0.37
Pdlim1O70400 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.37■□□□□ 0.37
Pdlim1O70400 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim1O70400 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Pdlim1O70400 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim1O70400 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim1O70400 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim1O70400 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.36■□□□□ 0.37
Pdlim1O70400 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Pdlim1O70400 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim1O70400 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim1O70400 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim1O70400 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim1O70400 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.36■□□□□ 0.37
Pdlim1O70400 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim1O70400 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim1O70400 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim1O70400 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim1O70400 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim1O70400 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms