Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim3O70209 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Pdlim3O70209 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pdlim3O70209 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pdlim3O70209 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pdlim3O70209 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pdlim3O70209 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Pdlim3O70209 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pdlim3O70209 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.02■□□□□ 0.16
Pdlim3O70209 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.02■□□□□ 0.16
Pdlim3O70209 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pdlim3O70209 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pdlim3O70209 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pdlim3O70209 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pdlim3O70209 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pdlim3O70209 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.02■□□□□ 0.15
Pdlim3O70209 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pdlim3O70209 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Pdlim3O70209 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim3O70209 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pdlim3O70209 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim3O70209 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.01■□□□□ 0.15
Pdlim3O70209 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim3O70209 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Pdlim3O70209 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim3O70209 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim3O70209 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim3O70209 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim3O70209 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim3O70209 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim3O70209 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdlim3O70209 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim3O70209 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim3O70209 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim3O70209 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim3O70209 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim3O70209 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim3O70209 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim3O70209 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim3O70209 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim3O70209 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16■□□□□ 0.15
Pdlim3O70209 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pdlim3O70209 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16■□□□□ 0.15
Pdlim3O70209 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16■□□□□ 0.15
Pdlim3O70209 Gm6420-201ENSMUST00000193885 723 ntBASIC16■□□□□ 0.15
Pdlim3O70209 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim3O70209 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim3O70209 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim3O70209 Ddx41-204ENSMUST00000224765 2199 ntBASIC16■□□□□ 0.15
Pdlim3O70209 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pdlim3O70209 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Pdlim3O70209 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Pdlim3O70209 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim3O70209 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.99■□□□□ 0.15
Pdlim3O70209 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim3O70209 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim3O70209 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.99■□□□□ 0.15
Pdlim3O70209 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.99■□□□□ 0.15
Pdlim3O70209 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.99■□□□□ 0.15
Pdlim3O70209 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim3O70209 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim3O70209 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim3O70209 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Pdlim3O70209 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim3O70209 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim3O70209 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim3O70209 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim3O70209 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim3O70209 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim3O70209 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim3O70209 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim3O70209 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim3O70209 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim3O70209 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
Pdlim3O70209 Nespas-201ENSMUST00000143738 1083 ntBASIC15.98■□□□□ 0.15
Pdlim3O70209 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Pdlim3O70209 Gm2011-201ENSMUST00000203124 1263 ntBASIC15.98■□□□□ 0.15
Pdlim3O70209 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim3O70209 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim3O70209 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim3O70209 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Pdlim3O70209 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pdlim3O70209 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim3O70209 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim3O70209 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim3O70209 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim3O70209 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim3O70209 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.98■□□□□ 0.15
Pdlim3O70209 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim3O70209 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim3O70209 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pdlim3O70209 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pdlim3O70209 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.97■□□□□ 0.15
Pdlim3O70209 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.97■□□□□ 0.15
Pdlim3O70209 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim3O70209 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim3O70209 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim3O70209 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Pdlim3O70209 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim3O70209 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms