Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC21.54■■□□□ 1.04
Mmp8O70138 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Mmp8O70138 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.54■■□□□ 1.04
Mmp8O70138 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Mmp8O70138 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Mmp8O70138 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.54■■□□□ 1.04
Mmp8O70138 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.54■■□□□ 1.04
Mmp8O70138 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Mmp8O70138 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Mmp8O70138 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Mmp8O70138 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Mmp8O70138 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Mmp8O70138 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mmp8O70138 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mmp8O70138 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mmp8O70138 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.53■■□□□ 1.04
Mmp8O70138 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
Mmp8O70138 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mmp8O70138 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mmp8O70138 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mmp8O70138 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Mmp8O70138 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Mmp8O70138 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Mmp8O70138 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mmp8O70138 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.53■■□□□ 1.04
Mmp8O70138 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Mmp8O70138 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Mmp8O70138 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Mmp8O70138 Gm715-201ENSMUST00000117865 831 ntBASIC21.52■■□□□ 1.04
Mmp8O70138 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.52■■□□□ 1.04
Mmp8O70138 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Mmp8O70138 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.52■■□□□ 1.04
Mmp8O70138 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Mmp8O70138 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.52■■□□□ 1.04
Mmp8O70138 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Mmp8O70138 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Mmp8O70138 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Mmp8O70138 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Mmp8O70138 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Mmp8O70138 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Mmp8O70138 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Mmp8O70138 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Mmp8O70138 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Mmp8O70138 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Mmp8O70138 Gm7712-202ENSMUST00000222331 1510 ntBASIC21.51■■□□□ 1.03
Mmp8O70138 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Mmp8O70138 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Mmp8O70138 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC21.51■■□□□ 1.03
Mmp8O70138 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Mmp8O70138 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.51■■□□□ 1.03
Mmp8O70138 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Mmp8O70138 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.51■■□□□ 1.03
Mmp8O70138 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Mmp8O70138 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Mmp8O70138 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Mmp8O70138 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Mmp8O70138 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC21.51■■□□□ 1.03
Mmp8O70138 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Mmp8O70138 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Mmp8O70138 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Mmp8O70138 AC125311.2-201ENSMUST00000227477 1940 ntBASIC21.51■■□□□ 1.03
Mmp8O70138 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Mmp8O70138 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Mmp8O70138 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Mmp8O70138 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
Mmp8O70138 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.5■■□□□ 1.03
Mmp8O70138 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.5■■□□□ 1.03
Mmp8O70138 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.5■■□□□ 1.03
Mmp8O70138 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.5■■□□□ 1.03
Mmp8O70138 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Mmp8O70138 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Mmp8O70138 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Mmp8O70138 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Mmp8O70138 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Mmp8O70138 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Mmp8O70138 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Mmp8O70138 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Mmp8O70138 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Mmp8O70138 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Mmp8O70138 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Mmp8O70138 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Mmp8O70138 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Mmp8O70138 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Mmp8O70138 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.49■■□□□ 1.03
Mmp8O70138 Gm16042-201ENSMUST00000204813 1247 ntBASIC21.49■■□□□ 1.03
Mmp8O70138 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Mmp8O70138 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Mmp8O70138 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Mmp8O70138 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC21.49■■□□□ 1.03
Mmp8O70138 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
Mmp8O70138 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mmp8O70138 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mmp8O70138 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mmp8O70138 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mmp8O70138 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Mmp8O70138 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Mmp8O70138 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC21.48■■□□□ 1.03
Mmp8O70138 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mmp8O70138 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mmp8O70138 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms