Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ldb2O55203 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.56■□□□□ 0.4
Ldb2O55203 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.56■□□□□ 0.4
Ldb2O55203 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ldb2O55203 Gm18025-201ENSMUST00000221733 862 ntBASIC17.56■□□□□ 0.4
Ldb2O55203 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ldb2O55203 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ldb2O55203 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ldb2O55203 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ldb2O55203 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ldb2O55203 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ldb2O55203 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Ldb2O55203 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.55■□□□□ 0.4
Ldb2O55203 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb2O55203 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.55■□□□□ 0.4
Ldb2O55203 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb2O55203 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.55■□□□□ 0.4
Ldb2O55203 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb2O55203 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.55■□□□□ 0.4
Ldb2O55203 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb2O55203 Mir8112-201ENSMUST00000184382 131 ntBASIC17.55■□□□□ 0.4
Ldb2O55203 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb2O55203 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.55■□□□□ 0.4
Ldb2O55203 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb2O55203 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Ldb2O55203 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.55■□□□□ 0.4
Ldb2O55203 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb2O55203 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb2O55203 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Ldb2O55203 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
Ldb2O55203 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb2O55203 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Ldb2O55203 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ldb2O55203 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ldb2O55203 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ldb2O55203 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.54■□□□□ 0.4
Ldb2O55203 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ldb2O55203 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ldb2O55203 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.54■□□□□ 0.4
Ldb2O55203 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ldb2O55203 Gm42545-201ENSMUST00000202755 922 ntBASIC17.54■□□□□ 0.4
Ldb2O55203 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ldb2O55203 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.54■□□□□ 0.4
Ldb2O55203 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.54■□□□□ 0.4
Ldb2O55203 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.54■□□□□ 0.4
Ldb2O55203 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ldb2O55203 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ldb2O55203 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ldb2O55203 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.54■□□□□ 0.4
Ldb2O55203 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ldb2O55203 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.54■□□□□ 0.4
Ldb2O55203 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ldb2O55203 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ldb2O55203 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ldb2O55203 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ldb2O55203 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ldb2O55203 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ldb2O55203 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.53■□□□□ 0.4
Ldb2O55203 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ldb2O55203 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.53■□□□□ 0.4
Ldb2O55203 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ldb2O55203 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.53■□□□□ 0.4
Ldb2O55203 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Ldb2O55203 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ldb2O55203 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ldb2O55203 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ldb2O55203 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ldb2O55203 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ldb2O55203 Gm20760-201ENSMUST00000179197 648 ntBASIC17.52■□□□□ 0.4
Ldb2O55203 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ldb2O55203 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ldb2O55203 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ldb2O55203 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ldb2O55203 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ldb2O55203 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ldb2O55203 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ldb2O55203 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ldb2O55203 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ldb2O55203 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
Ldb2O55203 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Ldb2O55203 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ldb2O55203 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ldb2O55203 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ldb2O55203 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ldb2O55203 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ldb2O55203 Gm6576-201ENSMUST00000169678 883 ntBASIC17.51■□□□□ 0.39
Ldb2O55203 Gm37292-201ENSMUST00000192062 758 ntBASIC17.51■□□□□ 0.39
Ldb2O55203 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.51■□□□□ 0.39
Ldb2O55203 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.51■□□□□ 0.39
Ldb2O55203 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ldb2O55203 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ldb2O55203 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ldb2O55203 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.51■□□□□ 0.39
Ldb2O55203 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ldb2O55203 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ldb2O55203 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ldb2O55203 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ldb2O55203 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ldb2O55203 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ldb2O55203 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms