Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trdmt1O55055 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trdmt1O55055 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trdmt1O55055 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trdmt1O55055 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trdmt1O55055 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trdmt1O55055 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trdmt1O55055 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trdmt1O55055 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trdmt1O55055 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trdmt1O55055 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trdmt1O55055 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.46■□□□□ 0.71
Trdmt1O55055 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trdmt1O55055 Gm9013-201ENSMUST00000132939 882 ntBASIC19.46■□□□□ 0.71
Trdmt1O55055 Gm27704-201ENSMUST00000185094 107 ntBASIC19.46■□□□□ 0.71
Trdmt1O55055 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trdmt1O55055 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trdmt1O55055 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trdmt1O55055 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trdmt1O55055 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trdmt1O55055 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trdmt1O55055 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trdmt1O55055 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trdmt1O55055 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
Trdmt1O55055 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trdmt1O55055 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trdmt1O55055 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trdmt1O55055 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trdmt1O55055 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trdmt1O55055 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.44■□□□□ 0.7
Trdmt1O55055 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trdmt1O55055 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Trdmt1O55055 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trdmt1O55055 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trdmt1O55055 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trdmt1O55055 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trdmt1O55055 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trdmt1O55055 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trdmt1O55055 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trdmt1O55055 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trdmt1O55055 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trdmt1O55055 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trdmt1O55055 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trdmt1O55055 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trdmt1O55055 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trdmt1O55055 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trdmt1O55055 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trdmt1O55055 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.43■□□□□ 0.7
Trdmt1O55055 Gm29518-201ENSMUST00000190858 372 ntBASIC19.43■□□□□ 0.7
Trdmt1O55055 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.43■□□□□ 0.7
Trdmt1O55055 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trdmt1O55055 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.43■□□□□ 0.7
Trdmt1O55055 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trdmt1O55055 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trdmt1O55055 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trdmt1O55055 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.43■□□□□ 0.7
Trdmt1O55055 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trdmt1O55055 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trdmt1O55055 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trdmt1O55055 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trdmt1O55055 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trdmt1O55055 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trdmt1O55055 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trdmt1O55055 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.42■□□□□ 0.7
Trdmt1O55055 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trdmt1O55055 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trdmt1O55055 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trdmt1O55055 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trdmt1O55055 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trdmt1O55055 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
Trdmt1O55055 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trdmt1O55055 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trdmt1O55055 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trdmt1O55055 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trdmt1O55055 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trdmt1O55055 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trdmt1O55055 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trdmt1O55055 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.41■□□□□ 0.7
Trdmt1O55055 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trdmt1O55055 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trdmt1O55055 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trdmt1O55055 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.41■□□□□ 0.7
Trdmt1O55055 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trdmt1O55055 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.41■□□□□ 0.7
Trdmt1O55055 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trdmt1O55055 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trdmt1O55055 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trdmt1O55055 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trdmt1O55055 Golph3-205ENSMUST00000228671 2842 ntBASIC19.41■□□□□ 0.7
Trdmt1O55055 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trdmt1O55055 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.4■□□□□ 0.7
Trdmt1O55055 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trdmt1O55055 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trdmt1O55055 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.4■□□□□ 0.7
Trdmt1O55055 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trdmt1O55055 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trdmt1O55055 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trdmt1O55055 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trdmt1O55055 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trdmt1O55055 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms