Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl13O55038 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cxcl13O55038 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl13O55038 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cxcl13O55038 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl13O55038 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl13O55038 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl13O55038 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl13O55038 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl13O55038 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl13O55038 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl13O55038 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl13O55038 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl13O55038 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl13O55038 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl13O55038 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl13O55038 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl13O55038 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl13O55038 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl13O55038 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl13O55038 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Cxcl13O55038 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl13O55038 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cxcl13O55038 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cxcl13O55038 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cxcl13O55038 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl13O55038 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl13O55038 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl13O55038 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl13O55038 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl13O55038 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.93□□□□□ -0.02
Cxcl13O55038 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl13O55038 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl13O55038 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cxcl13O55038 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl13O55038 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cxcl13O55038 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl13O55038 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl13O55038 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl13O55038 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl13O55038 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl13O55038 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cxcl13O55038 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cxcl13O55038 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cxcl13O55038 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.92□□□□□ -0.02
Cxcl13O55038 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.92□□□□□ -0.02
Cxcl13O55038 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cxcl13O55038 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.92□□□□□ -0.02
Cxcl13O55038 Gm24841-201ENSMUST00000158676 357 ntBASIC14.92□□□□□ -0.02
Cxcl13O55038 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.92□□□□□ -0.02
Cxcl13O55038 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.92□□□□□ -0.02
Cxcl13O55038 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.92□□□□□ -0.02
Cxcl13O55038 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Cxcl13O55038 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl13O55038 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Cxcl13O55038 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl13O55038 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cxcl13O55038 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Cxcl13O55038 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl13O55038 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl13O55038 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.92□□□□□ -0.02
Cxcl13O55038 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl13O55038 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl13O55038 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cxcl13O55038 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl13O55038 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl13O55038 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.91□□□□□ -0.02
Cxcl13O55038 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl13O55038 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl13O55038 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl13O55038 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl13O55038 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl13O55038 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.91□□□□□ -0.02
Cxcl13O55038 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Cxcl13O55038 Gm18959-201ENSMUST00000208954 655 ntBASIC14.91□□□□□ -0.02
Cxcl13O55038 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.91□□□□□ -0.02
Cxcl13O55038 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl13O55038 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Cxcl13O55038 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl13O55038 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl13O55038 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl13O55038 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl13O55038 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.9□□□□□ -0.02
Cxcl13O55038 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.9□□□□□ -0.02
Cxcl13O55038 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl13O55038 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl13O55038 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl13O55038 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl13O55038 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl13O55038 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.9□□□□□ -0.02
Cxcl13O55038 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cxcl13O55038 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl13O55038 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl13O55038 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl13O55038 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.9□□□□□ -0.02
Cxcl13O55038 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl13O55038 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl13O55038 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl13O55038 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl13O55038 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms