Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BckdkO55028 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.36■□□□□ 0.21
BckdkO55028 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BckdkO55028 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BckdkO55028 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.36■□□□□ 0.21
BckdkO55028 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BckdkO55028 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.36■□□□□ 0.21
BckdkO55028 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
BckdkO55028 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.36■□□□□ 0.21
BckdkO55028 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
BckdkO55028 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
BckdkO55028 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
BckdkO55028 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BckdkO55028 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
BckdkO55028 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.36■□□□□ 0.21
BckdkO55028 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BckdkO55028 Flg-201ENSMUST00000050758 1488 ntBASIC16.35■□□□□ 0.21
BckdkO55028 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
BckdkO55028 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BckdkO55028 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BckdkO55028 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BckdkO55028 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BckdkO55028 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BckdkO55028 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.35■□□□□ 0.21
BckdkO55028 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.35■□□□□ 0.21
BckdkO55028 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
BckdkO55028 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.35■□□□□ 0.21
BckdkO55028 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BckdkO55028 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
BckdkO55028 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BckdkO55028 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BckdkO55028 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BckdkO55028 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BckdkO55028 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
BckdkO55028 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.35■□□□□ 0.21
BckdkO55028 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BckdkO55028 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.35■□□□□ 0.21
BckdkO55028 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BckdkO55028 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
BckdkO55028 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BckdkO55028 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.34■□□□□ 0.21
BckdkO55028 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
BckdkO55028 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BckdkO55028 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BckdkO55028 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BckdkO55028 Gm13158-201ENSMUST00000122007 736 ntBASIC16.34■□□□□ 0.21
BckdkO55028 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BckdkO55028 Gm6576-201ENSMUST00000169678 883 ntBASIC16.34■□□□□ 0.21
BckdkO55028 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.34■□□□□ 0.21
BckdkO55028 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
BckdkO55028 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BckdkO55028 Fst-202ENSMUST00000223640 2612 ntBASIC16.34■□□□□ 0.21
BckdkO55028 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BckdkO55028 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.34■□□□□ 0.21
BckdkO55028 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
BckdkO55028 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BckdkO55028 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BckdkO55028 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BckdkO55028 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BckdkO55028 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
BckdkO55028 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
BckdkO55028 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
BckdkO55028 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
BckdkO55028 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
BckdkO55028 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
BckdkO55028 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BckdkO55028 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BckdkO55028 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BckdkO55028 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BckdkO55028 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
BckdkO55028 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BckdkO55028 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BckdkO55028 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BckdkO55028 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BckdkO55028 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BckdkO55028 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BckdkO55028 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
BckdkO55028 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
BckdkO55028 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BckdkO55028 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BckdkO55028 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
BckdkO55028 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
BckdkO55028 Gm15378-201ENSMUST00000121894 207 ntBASIC16.32■□□□□ 0.2
BckdkO55028 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BckdkO55028 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
BckdkO55028 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.32■□□□□ 0.2
BckdkO55028 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.32■□□□□ 0.2
BckdkO55028 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
BckdkO55028 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.32■□□□□ 0.2
BckdkO55028 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.32■□□□□ 0.2
BckdkO55028 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BckdkO55028 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BckdkO55028 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BckdkO55028 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BckdkO55028 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BckdkO55028 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BckdkO55028 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
BckdkO55028 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.31■□□□□ 0.2
BckdkO55028 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
BckdkO55028 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms