Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Gm4968-201ENSMUST00000071458 858 ntBASIC18.81■□□□□ 0.6
Kcnu1O54982 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Kcnu1O54982 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.81■□□□□ 0.6
Kcnu1O54982 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Kcnu1O54982 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Kcnu1O54982 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Kcnu1O54982 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Kcnu1O54982 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Kcnu1O54982 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Kcnu1O54982 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Kcnu1O54982 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Kcnu1O54982 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.8■□□□□ 0.6
Kcnu1O54982 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.8■□□□□ 0.6
Kcnu1O54982 Gm2559-201ENSMUST00000201323 363 ntBASIC18.8■□□□□ 0.6
Kcnu1O54982 Gm10602-201ENSMUST00000098239 609 ntBASIC18.8■□□□□ 0.6
Kcnu1O54982 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Kcnu1O54982 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.8■□□□□ 0.6
Kcnu1O54982 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.8■□□□□ 0.6
Kcnu1O54982 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Kcnu1O54982 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Kcnu1O54982 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Kcnu1O54982 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Kcnu1O54982 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Kcnu1O54982 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.79■□□□□ 0.6
Kcnu1O54982 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Kcnu1O54982 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Kcnu1O54982 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Kcnu1O54982 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Kcnu1O54982 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Kcnu1O54982 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Kcnu1O54982 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Kcnu1O54982 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Kcnu1O54982 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Kcnu1O54982 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Kcnu1O54982 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Kcnu1O54982 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Kcnu1O54982 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Kcnu1O54982 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Kcnu1O54982 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Kcnu1O54982 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Kcnu1O54982 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Kcnu1O54982 Gm12896-201ENSMUST00000118430 226 ntBASIC18.78■□□□□ 0.6
Kcnu1O54982 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Kcnu1O54982 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Kcnu1O54982 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Kcnu1O54982 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Kcnu1O54982 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Kcnu1O54982 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Kcnu1O54982 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Kcnu1O54982 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Kcnu1O54982 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Kcnu1O54982 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.77■□□□□ 0.6
Kcnu1O54982 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Kcnu1O54982 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Kcnu1O54982 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.77■□□□□ 0.6
Kcnu1O54982 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Kcnu1O54982 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Kcnu1O54982 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Kcnu1O54982 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Kcnu1O54982 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Kcnu1O54982 Gm11249-201ENSMUST00000117071 859 ntBASIC18.77■□□□□ 0.6
Kcnu1O54982 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Kcnu1O54982 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.77■□□□□ 0.6
Kcnu1O54982 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Kcnu1O54982 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Kcnu1O54982 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.77■□□□□ 0.59
Kcnu1O54982 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Kcnu1O54982 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Kcnu1O54982 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Kcnu1O54982 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Kcnu1O54982 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.76■□□□□ 0.59
Kcnu1O54982 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Kcnu1O54982 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Kcnu1O54982 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Kcnu1O54982 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Kcnu1O54982 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Kcnu1O54982 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Kcnu1O54982 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Kcnu1O54982 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Kcnu1O54982 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Kcnu1O54982 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Kcnu1O54982 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Kcnu1O54982 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Kcnu1O54982 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Kcnu1O54982 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Kcnu1O54982 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Kcnu1O54982 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Kcnu1O54982 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Kcnu1O54982 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.75■□□□□ 0.59
Kcnu1O54982 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Kcnu1O54982 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Kcnu1O54982 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Kcnu1O54982 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Kcnu1O54982 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Kcnu1O54982 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Kcnu1O54982 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Kcnu1O54982 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Kcnu1O54982 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Kcnu1O54982 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Kcnu1O54982 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms