Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Per2O54943 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Per2O54943 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Per2O54943 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.41■□□□□ 0.54
Per2O54943 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Per2O54943 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.41■□□□□ 0.54
Per2O54943 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Per2O54943 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Per2O54943 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Per2O54943 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Per2O54943 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Per2O54943 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Per2O54943 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Per2O54943 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Per2O54943 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Per2O54943 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Per2O54943 Gm29791-202ENSMUST00000207888 369 ntBASIC18.4■□□□□ 0.54
Per2O54943 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Per2O54943 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.4■□□□□ 0.54
Per2O54943 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Per2O54943 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Per2O54943 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.4■□□□□ 0.54
Per2O54943 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Per2O54943 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Per2O54943 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Per2O54943 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Per2O54943 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Per2O54943 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Per2O54943 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Per2O54943 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.39■□□□□ 0.53
Per2O54943 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Per2O54943 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Per2O54943 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Per2O54943 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.39■□□□□ 0.53
Per2O54943 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.39■□□□□ 0.53
Per2O54943 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Per2O54943 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Per2O54943 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Per2O54943 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Per2O54943 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Per2O54943 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Per2O54943 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Per2O54943 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Per2O54943 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Per2O54943 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Per2O54943 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Per2O54943 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.38■□□□□ 0.53
Per2O54943 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.38■□□□□ 0.53
Per2O54943 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.38■□□□□ 0.53
Per2O54943 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Per2O54943 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.38■□□□□ 0.53
Per2O54943 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Per2O54943 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Per2O54943 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Per2O54943 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Per2O54943 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Per2O54943 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Per2O54943 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Per2O54943 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Per2O54943 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Per2O54943 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Per2O54943 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Per2O54943 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Per2O54943 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Per2O54943 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.37■□□□□ 0.53
Per2O54943 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Per2O54943 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Per2O54943 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Per2O54943 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Per2O54943 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Per2O54943 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.36■□□□□ 0.53
Per2O54943 Mir2861-201ENSMUST00000175539 82 ntBASIC18.36■□□□□ 0.53
Per2O54943 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Per2O54943 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.36■□□□□ 0.53
Per2O54943 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Per2O54943 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Per2O54943 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Per2O54943 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Per2O54943 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Per2O54943 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Per2O54943 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Per2O54943 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Per2O54943 Dio3-201ENSMUST00000097228 1449 ntBASIC18.36■□□□□ 0.53
Per2O54943 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Per2O54943 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Per2O54943 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Per2O54943 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Per2O54943 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Per2O54943 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Per2O54943 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Per2O54943 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Per2O54943 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.35■□□□□ 0.53
Per2O54943 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Per2O54943 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Per2O54943 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Per2O54943 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Per2O54943 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Per2O54943 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Per2O54943 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Per2O54943 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms