Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn5O54942 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn5O54942 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn5O54942 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn5O54942 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn5O54942 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cldn5O54942 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Cldn5O54942 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cldn5O54942 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.33■□□□□ 0.53
Cldn5O54942 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cldn5O54942 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cldn5O54942 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cldn5O54942 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cldn5O54942 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.33■□□□□ 0.52
Cldn5O54942 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.33■□□□□ 0.52
Cldn5O54942 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Cldn5O54942 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cldn5O54942 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cldn5O54942 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cldn5O54942 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cldn5O54942 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cldn5O54942 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
Cldn5O54942 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.33■□□□□ 0.52
Cldn5O54942 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cldn5O54942 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn5O54942 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
Cldn5O54942 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn5O54942 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn5O54942 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn5O54942 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cldn5O54942 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cldn5O54942 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.32■□□□□ 0.52
Cldn5O54942 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn5O54942 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.32■□□□□ 0.52
Cldn5O54942 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn5O54942 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn5O54942 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn5O54942 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn5O54942 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn5O54942 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn5O54942 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn5O54942 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn5O54942 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn5O54942 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn5O54942 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn5O54942 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cldn5O54942 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cldn5O54942 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cldn5O54942 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Cldn5O54942 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cldn5O54942 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cldn5O54942 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cldn5O54942 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.31■□□□□ 0.52
Cldn5O54942 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn5O54942 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn5O54942 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn5O54942 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn5O54942 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn5O54942 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn5O54942 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn5O54942 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn5O54942 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn5O54942 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn5O54942 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn5O54942 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn5O54942 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Cldn5O54942 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.3■□□□□ 0.52
Cldn5O54942 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.3■□□□□ 0.52
Cldn5O54942 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn5O54942 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.3■□□□□ 0.52
Cldn5O54942 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn5O54942 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn5O54942 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Cldn5O54942 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn5O54942 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn5O54942 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn5O54942 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn5O54942 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cldn5O54942 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn5O54942 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn5O54942 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn5O54942 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn5O54942 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn5O54942 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cldn5O54942 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.29■□□□□ 0.52
Cldn5O54942 Gm11539-201ENSMUST00000119837 557 ntBASIC18.29■□□□□ 0.52
Cldn5O54942 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cldn5O54942 Gm13436-201ENSMUST00000120418 567 ntBASIC18.29■□□□□ 0.52
Cldn5O54942 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.29■□□□□ 0.52
Cldn5O54942 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn5O54942 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cldn5O54942 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn5O54942 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn5O54942 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn5O54942 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn5O54942 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn5O54942 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn5O54942 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn5O54942 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn5O54942 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms