Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Limk2O54785 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Limk2O54785 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Limk2O54785 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.92■□□□□ 0.46
Limk2O54785 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Limk2O54785 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Limk2O54785 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Limk2O54785 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Limk2O54785 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Limk2O54785 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Limk2O54785 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Limk2O54785 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Limk2O54785 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Limk2O54785 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.91■□□□□ 0.46
Limk2O54785 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.91■□□□□ 0.46
Limk2O54785 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Limk2O54785 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Limk2O54785 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Limk2O54785 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Limk2O54785 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Limk2O54785 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Limk2O54785 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Limk2O54785 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Limk2O54785 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limk2O54785 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limk2O54785 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limk2O54785 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.9■□□□□ 0.46
Limk2O54785 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limk2O54785 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limk2O54785 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limk2O54785 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limk2O54785 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limk2O54785 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Limk2O54785 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Limk2O54785 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.9■□□□□ 0.46
Limk2O54785 Gm9987-201ENSMUST00000069768 567 ntBASIC17.9■□□□□ 0.46
Limk2O54785 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limk2O54785 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limk2O54785 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limk2O54785 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.9■□□□□ 0.46
Limk2O54785 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limk2O54785 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limk2O54785 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limk2O54785 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limk2O54785 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Limk2O54785 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Limk2O54785 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.89■□□□□ 0.45
Limk2O54785 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Limk2O54785 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limk2O54785 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limk2O54785 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limk2O54785 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limk2O54785 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Limk2O54785 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.89■□□□□ 0.45
Limk2O54785 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Limk2O54785 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Limk2O54785 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limk2O54785 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limk2O54785 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limk2O54785 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Limk2O54785 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
Limk2O54785 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limk2O54785 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Limk2O54785 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limk2O54785 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limk2O54785 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limk2O54785 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limk2O54785 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.88■□□□□ 0.45
Limk2O54785 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limk2O54785 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.88■□□□□ 0.45
Limk2O54785 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Limk2O54785 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.88■□□□□ 0.45
Limk2O54785 Gm18025-201ENSMUST00000221733 862 ntBASIC17.88■□□□□ 0.45
Limk2O54785 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limk2O54785 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limk2O54785 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limk2O54785 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limk2O54785 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Limk2O54785 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Limk2O54785 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limk2O54785 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limk2O54785 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.87■□□□□ 0.45
Limk2O54785 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Limk2O54785 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Limk2O54785 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.87■□□□□ 0.45
Limk2O54785 Mir5122-201ENSMUST00000175004 89 ntBASIC17.87■□□□□ 0.45
Limk2O54785 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Limk2O54785 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.87■□□□□ 0.45
Limk2O54785 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.87■□□□□ 0.45
Limk2O54785 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Limk2O54785 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Limk2O54785 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Limk2O54785 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Limk2O54785 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Limk2O54785 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Limk2O54785 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Limk2O54785 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.86■□□□□ 0.45
Limk2O54785 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Limk2O54785 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Limk2O54785 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms