Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Ccr6O54689 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccr6O54689 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccr6O54689 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccr6O54689 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Ccr6O54689 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccr6O54689 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccr6O54689 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccr6O54689 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Ccr6O54689 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccr6O54689 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccr6O54689 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccr6O54689 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.83□□□□□ -0.03
Ccr6O54689 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccr6O54689 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccr6O54689 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccr6O54689 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccr6O54689 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.83□□□□□ -0.04
Ccr6O54689 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.83□□□□□ -0.04
Ccr6O54689 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.83□□□□□ -0.04
Ccr6O54689 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccr6O54689 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccr6O54689 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccr6O54689 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccr6O54689 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccr6O54689 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccr6O54689 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccr6O54689 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccr6O54689 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ccr6O54689 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccr6O54689 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccr6O54689 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccr6O54689 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccr6O54689 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccr6O54689 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.82□□□□□ -0.04
Ccr6O54689 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ccr6O54689 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccr6O54689 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccr6O54689 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ccr6O54689 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccr6O54689 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccr6O54689 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccr6O54689 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ccr6O54689 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccr6O54689 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccr6O54689 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccr6O54689 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Ccr6O54689 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccr6O54689 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccr6O54689 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.81□□□□□ -0.04
Ccr6O54689 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccr6O54689 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ccr6O54689 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccr6O54689 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccr6O54689 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccr6O54689 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccr6O54689 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ccr6O54689 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccr6O54689 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ccr6O54689 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.81□□□□□ -0.04
Ccr6O54689 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccr6O54689 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccr6O54689 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccr6O54689 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccr6O54689 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Ccr6O54689 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccr6O54689 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccr6O54689 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.81□□□□□ -0.04
Ccr6O54689 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ccr6O54689 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccr6O54689 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccr6O54689 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccr6O54689 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccr6O54689 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccr6O54689 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccr6O54689 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.8□□□□□ -0.04
Ccr6O54689 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccr6O54689 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.8□□□□□ -0.04
Ccr6O54689 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccr6O54689 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccr6O54689 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccr6O54689 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.8□□□□□ -0.04
Ccr6O54689 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.8□□□□□ -0.04
Ccr6O54689 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ccr6O54689 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccr6O54689 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccr6O54689 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccr6O54689 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccr6O54689 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ccr6O54689 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccr6O54689 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccr6O54689 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccr6O54689 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.79□□□□□ -0.04
Ccr6O54689 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ccr6O54689 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ccr6O54689 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ccr6O54689 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ccr6O54689 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccr6O54689 Gm43137-201ENSMUST00000198052 594 ntBASIC14.79□□□□□ -0.04
Ccr6O54689 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms