Protein–RNA interactions for Protein: O35980

Nthl1, Endonuclease III-like protein 1, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nthl1O35980 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nthl1O35980 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nthl1O35980 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nthl1O35980 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nthl1O35980 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Nthl1O35980 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nthl1O35980 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nthl1O35980 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nthl1O35980 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nthl1O35980 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.52■□□□□ 0.4
Nthl1O35980 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nthl1O35980 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Nthl1O35980 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nthl1O35980 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nthl1O35980 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.52■□□□□ 0.4
Nthl1O35980 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nthl1O35980 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nthl1O35980 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Nthl1O35980 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nthl1O35980 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Nthl1O35980 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nthl1O35980 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nthl1O35980 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nthl1O35980 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Nthl1O35980 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Nthl1O35980 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nthl1O35980 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.51■□□□□ 0.39
Nthl1O35980 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nthl1O35980 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nthl1O35980 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nthl1O35980 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Nthl1O35980 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nthl1O35980 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nthl1O35980 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.51■□□□□ 0.39
Nthl1O35980 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nthl1O35980 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nthl1O35980 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Nthl1O35980 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nthl1O35980 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nthl1O35980 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Nthl1O35980 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nthl1O35980 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nthl1O35980 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nthl1O35980 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nthl1O35980 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.5■□□□□ 0.39
Nthl1O35980 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nthl1O35980 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nthl1O35980 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.5■□□□□ 0.39
Nthl1O35980 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.5■□□□□ 0.39
Nthl1O35980 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nthl1O35980 Gm18959-201ENSMUST00000208954 655 ntBASIC17.5■□□□□ 0.39
Nthl1O35980 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Nthl1O35980 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nthl1O35980 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nthl1O35980 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nthl1O35980 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nthl1O35980 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nthl1O35980 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nthl1O35980 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Nthl1O35980 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nthl1O35980 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.49■□□□□ 0.39
Nthl1O35980 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Nthl1O35980 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nthl1O35980 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nthl1O35980 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nthl1O35980 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nthl1O35980 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.49■□□□□ 0.39
Nthl1O35980 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Nthl1O35980 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nthl1O35980 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.49■□□□□ 0.39
Nthl1O35980 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Nthl1O35980 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nthl1O35980 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nthl1O35980 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.49■□□□□ 0.39
Nthl1O35980 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Nthl1O35980 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nthl1O35980 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nthl1O35980 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nthl1O35980 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Nthl1O35980 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nthl1O35980 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nthl1O35980 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nthl1O35980 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.48■□□□□ 0.39
Nthl1O35980 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nthl1O35980 Gm24841-201ENSMUST00000158676 357 ntBASIC17.48■□□□□ 0.39
Nthl1O35980 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nthl1O35980 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nthl1O35980 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nthl1O35980 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nthl1O35980 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.48■□□□□ 0.39
Nthl1O35980 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nthl1O35980 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nthl1O35980 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nthl1O35980 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nthl1O35980 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nthl1O35980 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Nthl1O35980 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nthl1O35980 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nthl1O35980 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nthl1O35980 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms