Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptlc1O35704 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptlc1O35704 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptlc1O35704 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.29■□□□□ 0.68
Sptlc1O35704 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptlc1O35704 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sptlc1O35704 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptlc1O35704 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Sptlc1O35704 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptlc1O35704 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptlc1O35704 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptlc1O35704 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptlc1O35704 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptlc1O35704 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptlc1O35704 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sptlc1O35704 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.28■□□□□ 0.68
Sptlc1O35704 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptlc1O35704 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sptlc1O35704 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.28■□□□□ 0.68
Sptlc1O35704 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.28■□□□□ 0.68
Sptlc1O35704 Gm7791-201ENSMUST00000219066 539 ntBASIC19.28■□□□□ 0.68
Sptlc1O35704 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Sptlc1O35704 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptlc1O35704 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sptlc1O35704 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptlc1O35704 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptlc1O35704 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptlc1O35704 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptlc1O35704 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sptlc1O35704 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sptlc1O35704 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.27■□□□□ 0.68
Sptlc1O35704 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sptlc1O35704 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sptlc1O35704 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sptlc1O35704 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sptlc1O35704 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.27■□□□□ 0.68
Sptlc1O35704 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sptlc1O35704 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Sptlc1O35704 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sptlc1O35704 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Sptlc1O35704 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sptlc1O35704 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sptlc1O35704 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sptlc1O35704 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sptlc1O35704 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sptlc1O35704 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sptlc1O35704 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sptlc1O35704 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sptlc1O35704 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sptlc1O35704 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sptlc1O35704 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sptlc1O35704 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Sptlc1O35704 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sptlc1O35704 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sptlc1O35704 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sptlc1O35704 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sptlc1O35704 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sptlc1O35704 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sptlc1O35704 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.26■□□□□ 0.67
Sptlc1O35704 Gm45691-201ENSMUST00000206905 1120 ntBASIC19.26■□□□□ 0.67
Sptlc1O35704 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sptlc1O35704 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sptlc1O35704 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sptlc1O35704 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Sptlc1O35704 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sptlc1O35704 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sptlc1O35704 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sptlc1O35704 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sptlc1O35704 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sptlc1O35704 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sptlc1O35704 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sptlc1O35704 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sptlc1O35704 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.25■□□□□ 0.67
Sptlc1O35704 Gm6345-202ENSMUST00000180900 204 ntBASIC19.25■□□□□ 0.67
Sptlc1O35704 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sptlc1O35704 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sptlc1O35704 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sptlc1O35704 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sptlc1O35704 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sptlc1O35704 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sptlc1O35704 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sptlc1O35704 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sptlc1O35704 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sptlc1O35704 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sptlc1O35704 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sptlc1O35704 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Sptlc1O35704 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sptlc1O35704 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Sptlc1O35704 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.24■□□□□ 0.67
Sptlc1O35704 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.24■□□□□ 0.67
Sptlc1O35704 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sptlc1O35704 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sptlc1O35704 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sptlc1O35704 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.24■□□□□ 0.67
Sptlc1O35704 Gm7367-201ENSMUST00000057611 492 ntBASIC19.24■□□□□ 0.67
Sptlc1O35704 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sptlc1O35704 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sptlc1O35704 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Sptlc1O35704 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.24■□□□□ 0.67
Sptlc1O35704 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms