Protein–RNA interactions for Protein: O35609

Scamp3, Secretory carrier-associated membrane protein 3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp3O35609 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scamp3O35609 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Scamp3O35609 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scamp3O35609 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scamp3O35609 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scamp3O35609 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scamp3O35609 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scamp3O35609 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scamp3O35609 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Scamp3O35609 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scamp3O35609 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scamp3O35609 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scamp3O35609 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scamp3O35609 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scamp3O35609 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scamp3O35609 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Scamp3O35609 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scamp3O35609 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scamp3O35609 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Scamp3O35609 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scamp3O35609 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Scamp3O35609 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scamp3O35609 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scamp3O35609 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scamp3O35609 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scamp3O35609 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scamp3O35609 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scamp3O35609 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scamp3O35609 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scamp3O35609 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.52■□□□□ 0.4
Scamp3O35609 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.52■□□□□ 0.4
Scamp3O35609 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scamp3O35609 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Scamp3O35609 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.52■□□□□ 0.4
Scamp3O35609 Gm37292-201ENSMUST00000192062 758 ntBASIC17.52■□□□□ 0.4
Scamp3O35609 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scamp3O35609 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Scamp3O35609 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scamp3O35609 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scamp3O35609 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scamp3O35609 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scamp3O35609 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scamp3O35609 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scamp3O35609 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Scamp3O35609 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scamp3O35609 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.52■□□□□ 0.39
Scamp3O35609 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scamp3O35609 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Scamp3O35609 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scamp3O35609 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scamp3O35609 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Scamp3O35609 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scamp3O35609 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scamp3O35609 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scamp3O35609 Mir7071-201ENSMUST00000184847 69 ntBASIC17.51■□□□□ 0.39
Scamp3O35609 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scamp3O35609 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scamp3O35609 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scamp3O35609 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scamp3O35609 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scamp3O35609 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scamp3O35609 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Scamp3O35609 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.51■□□□□ 0.39
Scamp3O35609 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scamp3O35609 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scamp3O35609 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scamp3O35609 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Scamp3O35609 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scamp3O35609 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scamp3O35609 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scamp3O35609 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scamp3O35609 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scamp3O35609 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Scamp3O35609 Gm715-201ENSMUST00000117865 831 ntBASIC17.5■□□□□ 0.39
Scamp3O35609 Gm12382-201ENSMUST00000122005 922 ntBASIC17.5■□□□□ 0.39
Scamp3O35609 Mir2861-201ENSMUST00000175539 82 ntBASIC17.5■□□□□ 0.39
Scamp3O35609 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.5■□□□□ 0.39
Scamp3O35609 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.5■□□□□ 0.39
Scamp3O35609 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scamp3O35609 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Scamp3O35609 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.5■□□□□ 0.39
Scamp3O35609 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
Scamp3O35609 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Scamp3O35609 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scamp3O35609 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scamp3O35609 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Scamp3O35609 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.5■□□□□ 0.39
Scamp3O35609 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.5■□□□□ 0.39
Scamp3O35609 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.49■□□□□ 0.39
Scamp3O35609 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scamp3O35609 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scamp3O35609 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scamp3O35609 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scamp3O35609 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.49■□□□□ 0.39
Scamp3O35609 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.49■□□□□ 0.39
Scamp3O35609 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scamp3O35609 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scamp3O35609 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Scamp3O35609 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scamp3O35609 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms