Protein–RNA interactions for Protein: O35602

Rax, Retinal homeobox protein Rx, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaxO35602 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RaxO35602 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RaxO35602 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
RaxO35602 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RaxO35602 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RaxO35602 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RaxO35602 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RaxO35602 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RaxO35602 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RaxO35602 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.77■□□□□ 0.44
RaxO35602 Gm18958-201ENSMUST00000174258 762 ntBASIC17.77■□□□□ 0.44
RaxO35602 Gm37025-201ENSMUST00000195159 829 ntBASIC17.77■□□□□ 0.44
RaxO35602 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.77■□□□□ 0.44
RaxO35602 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RaxO35602 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RaxO35602 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RaxO35602 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RaxO35602 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RaxO35602 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RaxO35602 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RaxO35602 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RaxO35602 Gm24589-201ENSMUST00000116692 94 ntBASIC17.76■□□□□ 0.43
RaxO35602 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.76■□□□□ 0.43
RaxO35602 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.76■□□□□ 0.43
RaxO35602 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RaxO35602 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RaxO35602 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RaxO35602 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RaxO35602 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RaxO35602 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RaxO35602 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
RaxO35602 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RaxO35602 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RaxO35602 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RaxO35602 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RaxO35602 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RaxO35602 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RaxO35602 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RaxO35602 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RaxO35602 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.75■□□□□ 0.43
RaxO35602 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.75■□□□□ 0.43
RaxO35602 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RaxO35602 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RaxO35602 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RaxO35602 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RaxO35602 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RaxO35602 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RaxO35602 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RaxO35602 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RaxO35602 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RaxO35602 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RaxO35602 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RaxO35602 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.74■□□□□ 0.43
RaxO35602 Gm6623-201ENSMUST00000173570 544 ntBASIC17.74■□□□□ 0.43
RaxO35602 Gm27357-201ENSMUST00000183754 135 ntBASIC17.74■□□□□ 0.43
RaxO35602 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.74■□□□□ 0.43
RaxO35602 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.74■□□□□ 0.43
RaxO35602 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RaxO35602 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.74■□□□□ 0.43
RaxO35602 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RaxO35602 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RaxO35602 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RaxO35602 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RaxO35602 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RaxO35602 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
RaxO35602 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RaxO35602 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RaxO35602 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RaxO35602 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RaxO35602 Gm27742-201ENSMUST00000184667 60 ntBASIC17.73■□□□□ 0.43
RaxO35602 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RaxO35602 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.73■□□□□ 0.43
RaxO35602 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.73■□□□□ 0.43
RaxO35602 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RaxO35602 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RaxO35602 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RaxO35602 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RaxO35602 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RaxO35602 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RaxO35602 Mir770-201ENSMUST00000103252 94 ntBASIC17.72■□□□□ 0.43
RaxO35602 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.72■□□□□ 0.43
RaxO35602 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RaxO35602 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RaxO35602 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RaxO35602 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RaxO35602 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RaxO35602 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RaxO35602 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RaxO35602 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RaxO35602 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RaxO35602 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RaxO35602 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.71■□□□□ 0.43
RaxO35602 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RaxO35602 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RaxO35602 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RaxO35602 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RaxO35602 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RaxO35602 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RaxO35602 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RaxO35602 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms