Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.63■□□□□ 0.25
Abca4O35600 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Abca4O35600 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abca4O35600 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Abca4O35600 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.63■□□□□ 0.25
Abca4O35600 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.63■□□□□ 0.25
Abca4O35600 Gm24513-201ENSMUST00000174964 138 ntBASIC16.63■□□□□ 0.25
Abca4O35600 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.63■□□□□ 0.25
Abca4O35600 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Abca4O35600 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.63■□□□□ 0.25
Abca4O35600 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abca4O35600 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abca4O35600 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abca4O35600 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Abca4O35600 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abca4O35600 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Abca4O35600 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abca4O35600 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Abca4O35600 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abca4O35600 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Abca4O35600 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Abca4O35600 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abca4O35600 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Abca4O35600 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Abca4O35600 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Abca4O35600 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.62■□□□□ 0.25
Abca4O35600 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.62■□□□□ 0.25
Abca4O35600 Gm10060-201ENSMUST00000212002 111 ntBASIC16.62■□□□□ 0.25
Abca4O35600 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Abca4O35600 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abca4O35600 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.61■□□□□ 0.25
Abca4O35600 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abca4O35600 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Abca4O35600 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abca4O35600 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Abca4O35600 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Abca4O35600 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abca4O35600 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abca4O35600 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abca4O35600 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Abca4O35600 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.61■□□□□ 0.25
Abca4O35600 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Abca4O35600 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Abca4O35600 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Abca4O35600 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abca4O35600 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abca4O35600 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abca4O35600 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Abca4O35600 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abca4O35600 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abca4O35600 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Abca4O35600 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abca4O35600 Gm14494-201ENSMUST00000118786 435 ntBASIC16.6■□□□□ 0.25
Abca4O35600 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Abca4O35600 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.6■□□□□ 0.25
Abca4O35600 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.6■□□□□ 0.25
Abca4O35600 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Abca4O35600 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Abca4O35600 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Abca4O35600 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abca4O35600 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Abca4O35600 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.59■□□□□ 0.25
Abca4O35600 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abca4O35600 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Abca4O35600 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abca4O35600 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abca4O35600 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abca4O35600 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abca4O35600 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Abca4O35600 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Abca4O35600 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abca4O35600 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.59■□□□□ 0.25
Abca4O35600 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abca4O35600 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abca4O35600 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Abca4O35600 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abca4O35600 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.59■□□□□ 0.25
Abca4O35600 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Abca4O35600 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Abca4O35600 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Abca4O35600 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Abca4O35600 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Abca4O35600 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Abca4O35600 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Abca4O35600 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Abca4O35600 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.58■□□□□ 0.24
Abca4O35600 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Abca4O35600 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Abca4O35600 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Abca4O35600 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abca4O35600 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Abca4O35600 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.57■□□□□ 0.24
Abca4O35600 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abca4O35600 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abca4O35600 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abca4O35600 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abca4O35600 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Abca4O35600 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Abca4O35600 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abca4O35600 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms