Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clk2O35491 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clk2O35491 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clk2O35491 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clk2O35491 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clk2O35491 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.23■□□□□ 0.67
Clk2O35491 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clk2O35491 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Clk2O35491 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Clk2O35491 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.22■□□□□ 0.67
Clk2O35491 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.22■□□□□ 0.67
Clk2O35491 Gm27463-201ENSMUST00000183569 57 ntBASIC19.22■□□□□ 0.67
Clk2O35491 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clk2O35491 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clk2O35491 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clk2O35491 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.22■□□□□ 0.67
Clk2O35491 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clk2O35491 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Clk2O35491 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Clk2O35491 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clk2O35491 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clk2O35491 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clk2O35491 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clk2O35491 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Clk2O35491 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clk2O35491 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clk2O35491 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Clk2O35491 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clk2O35491 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Clk2O35491 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clk2O35491 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Clk2O35491 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.21■□□□□ 0.67
Clk2O35491 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.21■□□□□ 0.67
Clk2O35491 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.21■□□□□ 0.67
Clk2O35491 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clk2O35491 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Clk2O35491 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clk2O35491 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clk2O35491 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clk2O35491 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clk2O35491 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
Clk2O35491 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Clk2O35491 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.2■□□□□ 0.66
Clk2O35491 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clk2O35491 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.2■□□□□ 0.66
Clk2O35491 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clk2O35491 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clk2O35491 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clk2O35491 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clk2O35491 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clk2O35491 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clk2O35491 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clk2O35491 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clk2O35491 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.19■□□□□ 0.66
Clk2O35491 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clk2O35491 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clk2O35491 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clk2O35491 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Clk2O35491 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clk2O35491 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Clk2O35491 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.19■□□□□ 0.66
Clk2O35491 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clk2O35491 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clk2O35491 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clk2O35491 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clk2O35491 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clk2O35491 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clk2O35491 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clk2O35491 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clk2O35491 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clk2O35491 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Clk2O35491 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clk2O35491 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clk2O35491 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clk2O35491 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clk2O35491 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clk2O35491 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.18■□□□□ 0.66
Clk2O35491 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clk2O35491 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clk2O35491 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Clk2O35491 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clk2O35491 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clk2O35491 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Clk2O35491 Gm7638-201ENSMUST00000121348 967 ntBASIC19.17■□□□□ 0.66
Clk2O35491 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clk2O35491 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clk2O35491 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clk2O35491 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clk2O35491 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clk2O35491 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clk2O35491 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clk2O35491 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clk2O35491 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clk2O35491 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.17■□□□□ 0.66
Clk2O35491 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.16■□□□□ 0.66
Clk2O35491 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Clk2O35491 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clk2O35491 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clk2O35491 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clk2O35491 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms