Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Clcn6O35454 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC18.72■□□□□ 0.59
Clcn6O35454 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.72■□□□□ 0.59
Clcn6O35454 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Clcn6O35454 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.72■□□□□ 0.59
Clcn6O35454 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcn6O35454 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcn6O35454 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcn6O35454 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcn6O35454 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcn6O35454 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcn6O35454 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcn6O35454 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Clcn6O35454 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Clcn6O35454 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.72■□□□□ 0.59
Clcn6O35454 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcn6O35454 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcn6O35454 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Clcn6O35454 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Clcn6O35454 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clcn6O35454 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clcn6O35454 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clcn6O35454 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clcn6O35454 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clcn6O35454 Gm13146-201ENSMUST00000118508 780 ntBASIC18.71■□□□□ 0.59
Clcn6O35454 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.71■□□□□ 0.59
Clcn6O35454 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.71■□□□□ 0.59
Clcn6O35454 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Clcn6O35454 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.71■□□□□ 0.59
Clcn6O35454 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clcn6O35454 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clcn6O35454 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Clcn6O35454 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Clcn6O35454 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Clcn6O35454 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clcn6O35454 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clcn6O35454 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clcn6O35454 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Clcn6O35454 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clcn6O35454 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Clcn6O35454 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clcn6O35454 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clcn6O35454 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Clcn6O35454 Gm13505-201ENSMUST00000121666 817 ntBASIC18.7■□□□□ 0.58
Clcn6O35454 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Clcn6O35454 Gm27405-201ENSMUST00000184201 112 ntBASIC18.7■□□□□ 0.58
Clcn6O35454 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clcn6O35454 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clcn6O35454 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clcn6O35454 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Clcn6O35454 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clcn6O35454 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn6O35454 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.69■□□□□ 0.58
Clcn6O35454 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn6O35454 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Clcn6O35454 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Clcn6O35454 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn6O35454 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn6O35454 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn6O35454 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn6O35454 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn6O35454 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Clcn6O35454 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn6O35454 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.68■□□□□ 0.58
Clcn6O35454 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn6O35454 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn6O35454 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn6O35454 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn6O35454 Gm10849-201ENSMUST00000100397 618 ntBASIC18.68■□□□□ 0.58
Clcn6O35454 Gm16112-201ENSMUST00000159075 382 ntBASIC18.68■□□□□ 0.58
Clcn6O35454 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn6O35454 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Clcn6O35454 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn6O35454 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.68■□□□□ 0.58
Clcn6O35454 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Clcn6O35454 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.68■□□□□ 0.58
Clcn6O35454 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn6O35454 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Clcn6O35454 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn6O35454 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.68■□□□□ 0.58
Clcn6O35454 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Clcn6O35454 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn6O35454 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn6O35454 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn6O35454 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn6O35454 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn6O35454 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn6O35454 Gm10033-202ENSMUST00000211874 928 ntBASIC18.67■□□□□ 0.58
Clcn6O35454 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Clcn6O35454 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn6O35454 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.67■□□□□ 0.58
Clcn6O35454 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn6O35454 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn6O35454 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn6O35454 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn6O35454 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.66■□□□□ 0.58
Clcn6O35454 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn6O35454 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Clcn6O35454 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn6O35454 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms