Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cx3cl1O35188 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.55■□□□□ 0.24
Cx3cl1O35188 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cx3cl1O35188 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cx3cl1O35188 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cx3cl1O35188 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cx3cl1O35188 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cx3cl1O35188 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.55■□□□□ 0.24
Cx3cl1O35188 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.55■□□□□ 0.24
Cx3cl1O35188 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cx3cl1O35188 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cx3cl1O35188 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cx3cl1O35188 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cx3cl1O35188 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cx3cl1O35188 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cx3cl1O35188 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cx3cl1O35188 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cx3cl1O35188 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.55■□□□□ 0.24
Cx3cl1O35188 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.54■□□□□ 0.24
Cx3cl1O35188 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cl1O35188 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.54■□□□□ 0.24
Cx3cl1O35188 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cl1O35188 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cl1O35188 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cl1O35188 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cl1O35188 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cl1O35188 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cl1O35188 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.54■□□□□ 0.24
Cx3cl1O35188 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.54■□□□□ 0.24
Cx3cl1O35188 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.54■□□□□ 0.24
Cx3cl1O35188 Gm10812-201ENSMUST00000099864 546 ntBASIC16.54■□□□□ 0.24
Cx3cl1O35188 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cl1O35188 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cl1O35188 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cl1O35188 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cl1O35188 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cl1O35188 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cl1O35188 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cl1O35188 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cl1O35188 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.54■□□□□ 0.24
Cx3cl1O35188 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cl1O35188 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cl1O35188 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cl1O35188 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cl1O35188 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cl1O35188 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cl1O35188 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Cx3cl1O35188 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cl1O35188 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cl1O35188 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cl1O35188 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cl1O35188 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cl1O35188 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cl1O35188 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cl1O35188 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.53■□□□□ 0.24
Cx3cl1O35188 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cl1O35188 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Cx3cl1O35188 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cl1O35188 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.53■□□□□ 0.24
Cx3cl1O35188 Gm18025-201ENSMUST00000221733 862 ntBASIC16.53■□□□□ 0.24
Cx3cl1O35188 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cl1O35188 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cl1O35188 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cl1O35188 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cl1O35188 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cx3cl1O35188 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cx3cl1O35188 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.52■□□□□ 0.24
Cx3cl1O35188 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cx3cl1O35188 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cx3cl1O35188 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cx3cl1O35188 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cx3cl1O35188 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cx3cl1O35188 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cx3cl1O35188 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cx3cl1O35188 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cx3cl1O35188 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cx3cl1O35188 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cx3cl1O35188 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.52■□□□□ 0.23
Cx3cl1O35188 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cx3cl1O35188 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cx3cl1O35188 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cx3cl1O35188 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.51■□□□□ 0.23
Cx3cl1O35188 Gm42545-201ENSMUST00000202755 922 ntBASIC16.51■□□□□ 0.23
Cx3cl1O35188 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
Cx3cl1O35188 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cx3cl1O35188 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cx3cl1O35188 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cx3cl1O35188 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cx3cl1O35188 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cx3cl1O35188 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cx3cl1O35188 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cx3cl1O35188 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cx3cl1O35188 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cl1O35188 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cl1O35188 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cl1O35188 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cl1O35188 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cl1O35188 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.5■□□□□ 0.23
Cx3cl1O35188 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.5■□□□□ 0.23
Cx3cl1O35188 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms