Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hps1O08983 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hps1O08983 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hps1O08983 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hps1O08983 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hps1O08983 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hps1O08983 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hps1O08983 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Hps1O08983 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hps1O08983 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Hps1O08983 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hps1O08983 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Hps1O08983 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hps1O08983 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hps1O08983 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.36■□□□□ 0.21
Hps1O08983 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hps1O08983 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hps1O08983 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hps1O08983 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hps1O08983 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hps1O08983 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Hps1O08983 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hps1O08983 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.35■□□□□ 0.21
Hps1O08983 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hps1O08983 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hps1O08983 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.35■□□□□ 0.21
Hps1O08983 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hps1O08983 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hps1O08983 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hps1O08983 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.35■□□□□ 0.21
Hps1O08983 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.35■□□□□ 0.21
Hps1O08983 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hps1O08983 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Hps1O08983 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Hps1O08983 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Hps1O08983 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hps1O08983 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hps1O08983 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hps1O08983 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hps1O08983 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hps1O08983 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hps1O08983 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hps1O08983 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hps1O08983 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hps1O08983 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Hps1O08983 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Hps1O08983 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hps1O08983 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hps1O08983 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hps1O08983 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hps1O08983 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Hps1O08983 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hps1O08983 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.34■□□□□ 0.21
Hps1O08983 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hps1O08983 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hps1O08983 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hps1O08983 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.34■□□□□ 0.21
Hps1O08983 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hps1O08983 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hps1O08983 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hps1O08983 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hps1O08983 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hps1O08983 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hps1O08983 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Hps1O08983 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hps1O08983 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hps1O08983 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.33■□□□□ 0.2
Hps1O08983 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hps1O08983 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hps1O08983 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.33■□□□□ 0.2
Hps1O08983 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hps1O08983 Gm10812-201ENSMUST00000099864 546 ntBASIC16.33■□□□□ 0.2
Hps1O08983 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hps1O08983 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hps1O08983 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hps1O08983 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hps1O08983 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hps1O08983 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hps1O08983 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hps1O08983 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hps1O08983 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hps1O08983 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hps1O08983 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hps1O08983 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hps1O08983 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.32■□□□□ 0.2
Hps1O08983 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hps1O08983 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hps1O08983 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Hps1O08983 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hps1O08983 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hps1O08983 Gm13168-201ENSMUST00000121771 632 ntBASIC16.32■□□□□ 0.2
Hps1O08983 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hps1O08983 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.32■□□□□ 0.2
Hps1O08983 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.32■□□□□ 0.2
Hps1O08983 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hps1O08983 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hps1O08983 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hps1O08983 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hps1O08983 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hps1O08983 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms