Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.91■□□□□ 0.62
Usp35M0QWN7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Usp35M0QWN7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp35M0QWN7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.9■□□□□ 0.62
Usp35M0QWN7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp35M0QWN7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Usp35M0QWN7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.9■□□□□ 0.62
Usp35M0QWN7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Usp35M0QWN7 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp35M0QWN7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp35M0QWN7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp35M0QWN7 Mtag2-201ENSMUST00000058665 714 ntBASIC18.9■□□□□ 0.62
Usp35M0QWN7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp35M0QWN7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp35M0QWN7 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.9■□□□□ 0.62
Usp35M0QWN7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Usp35M0QWN7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Usp35M0QWN7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Usp35M0QWN7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Usp35M0QWN7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp35M0QWN7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp35M0QWN7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Usp35M0QWN7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Usp35M0QWN7 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.89■□□□□ 0.61
Usp35M0QWN7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp35M0QWN7 Gm10138-203ENSMUST00000206952 366 ntBASIC18.89■□□□□ 0.61
Usp35M0QWN7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp35M0QWN7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp35M0QWN7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Usp35M0QWN7 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp35M0QWN7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp35M0QWN7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp35M0QWN7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp35M0QWN7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp35M0QWN7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Usp35M0QWN7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp35M0QWN7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Usp35M0QWN7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp35M0QWN7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Usp35M0QWN7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Usp35M0QWN7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Usp35M0QWN7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp35M0QWN7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Usp35M0QWN7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Usp35M0QWN7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.88■□□□□ 0.61
Usp35M0QWN7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Usp35M0QWN7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp35M0QWN7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp35M0QWN7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Usp35M0QWN7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp35M0QWN7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp35M0QWN7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.87■□□□□ 0.61
Usp35M0QWN7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp35M0QWN7 Mir5122-201ENSMUST00000175004 89 ntBASIC18.87■□□□□ 0.61
Usp35M0QWN7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp35M0QWN7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.87■□□□□ 0.61
Usp35M0QWN7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp35M0QWN7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp35M0QWN7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp35M0QWN7 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.87■□□□□ 0.61
Usp35M0QWN7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp35M0QWN7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp35M0QWN7 Haglr-201ENSMUST00000100000 2085 ntBASIC18.86■□□□□ 0.61
Usp35M0QWN7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp35M0QWN7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp35M0QWN7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp35M0QWN7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp35M0QWN7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp35M0QWN7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp35M0QWN7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp35M0QWN7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Usp35M0QWN7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.86■□□□□ 0.61
Usp35M0QWN7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.86■□□□□ 0.61
Usp35M0QWN7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Usp35M0QWN7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.86■□□□□ 0.61
Usp35M0QWN7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp35M0QWN7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp35M0QWN7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp35M0QWN7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp35M0QWN7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.85■□□□□ 0.61
Usp35M0QWN7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Usp35M0QWN7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp35M0QWN7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.85■□□□□ 0.61
Usp35M0QWN7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp35M0QWN7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.85■□□□□ 0.61
Usp35M0QWN7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp35M0QWN7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.85■□□□□ 0.61
Usp35M0QWN7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp35M0QWN7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp35M0QWN7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Usp35M0QWN7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp35M0QWN7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Usp35M0QWN7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.84■□□□□ 0.61
Usp35M0QWN7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Usp35M0QWN7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Usp35M0QWN7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp35M0QWN7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp35M0QWN7 Gm15375-201ENSMUST00000119510 849 ntBASIC18.84■□□□□ 0.61
Usp35M0QWN7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Usp35M0QWN7 Gm38285-201ENSMUST00000192928 922 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms