Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.9■□□□□ 0.46
Ccdc188F6WEU2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc188F6WEU2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.9■□□□□ 0.46
Ccdc188F6WEU2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc188F6WEU2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc188F6WEU2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc188F6WEU2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc188F6WEU2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc188F6WEU2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Ccdc188F6WEU2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc188F6WEU2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc188F6WEU2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc188F6WEU2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc188F6WEU2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc188F6WEU2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc188F6WEU2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc188F6WEU2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc188F6WEU2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.89■□□□□ 0.45
Ccdc188F6WEU2 Gm24513-201ENSMUST00000174964 138 ntBASIC17.89■□□□□ 0.45
Ccdc188F6WEU2 Gm27397-201ENSMUST00000184997 107 ntBASIC17.89■□□□□ 0.45
Ccdc188F6WEU2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.89■□□□□ 0.45
Ccdc188F6WEU2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc188F6WEU2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc188F6WEU2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc188F6WEU2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc188F6WEU2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc188F6WEU2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.89■□□□□ 0.45
Ccdc188F6WEU2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc188F6WEU2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Gm44357-201ENSMUST00000195897 142 ntBASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Gm19658-201ENSMUST00000196231 138 ntBASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Gm44367-201ENSMUST00000196836 138 ntBASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Gm44350-201ENSMUST00000197197 138 ntBASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Gm44390-201ENSMUST00000197533 144 ntBASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Gm44313-201ENSMUST00000198018 138 ntBASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Gm44486-201ENSMUST00000198508 138 ntBASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Gm44454-201ENSMUST00000198541 138 ntBASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Gm44314-201ENSMUST00000199263 138 ntBASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Gm44394-201ENSMUST00000199558 138 ntBASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Gm44484-201ENSMUST00000199873 138 ntBASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Gm44466-201ENSMUST00000200264 138 ntBASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Gm44359-201ENSMUST00000200671 138 ntBASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc188F6WEU2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Ccdc188F6WEU2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc188F6WEU2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc188F6WEU2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc188F6WEU2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.87■□□□□ 0.45
Ccdc188F6WEU2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.87■□□□□ 0.45
Ccdc188F6WEU2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc188F6WEU2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc188F6WEU2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.87■□□□□ 0.45
Ccdc188F6WEU2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc188F6WEU2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc188F6WEU2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc188F6WEU2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc188F6WEU2 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.87■□□□□ 0.45
Ccdc188F6WEU2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc188F6WEU2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc188F6WEU2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc188F6WEU2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc188F6WEU2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc188F6WEU2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Gm12260-201ENSMUST00000122447 411 ntBASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Gm10060-201ENSMUST00000212002 111 ntBASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Gm10175-201ENSMUST00000086013 645 ntBASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc188F6WEU2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms