Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb9E9Q5G2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Pcdhb9E9Q5G2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb9E9Q5G2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb9E9Q5G2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb9E9Q5G2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb9E9Q5G2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb9E9Q5G2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb9E9Q5G2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Pcdhb9E9Q5G2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.79■□□□□ 0.92
Pcdhb9E9Q5G2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb9E9Q5G2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb9E9Q5G2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb9E9Q5G2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb9E9Q5G2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb9E9Q5G2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb9E9Q5G2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pcdhb9E9Q5G2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Pcdhb9E9Q5G2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb9E9Q5G2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb9E9Q5G2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb9E9Q5G2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb9E9Q5G2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Pcdhb9E9Q5G2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.78■□□□□ 0.92
Pcdhb9E9Q5G2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb9E9Q5G2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.78■□□□□ 0.92
Pcdhb9E9Q5G2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb9E9Q5G2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb9E9Q5G2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Pcdhb9E9Q5G2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb9E9Q5G2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb9E9Q5G2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
Pcdhb9E9Q5G2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.77■□□□□ 0.92
Pcdhb9E9Q5G2 Gm15565-201ENSMUST00000118890 427 ntBASIC20.77■□□□□ 0.92
Pcdhb9E9Q5G2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.77■□□□□ 0.92
Pcdhb9E9Q5G2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb9E9Q5G2 Gm24841-201ENSMUST00000158676 357 ntBASIC20.77■□□□□ 0.92
Pcdhb9E9Q5G2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb9E9Q5G2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.77■□□□□ 0.92
Pcdhb9E9Q5G2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb9E9Q5G2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb9E9Q5G2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb9E9Q5G2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb9E9Q5G2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb9E9Q5G2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb9E9Q5G2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb9E9Q5G2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.77■□□□□ 0.92
Pcdhb9E9Q5G2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
Pcdhb9E9Q5G2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdhb9E9Q5G2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb9E9Q5G2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb9E9Q5G2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Pcdhb9E9Q5G2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb9E9Q5G2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.76■□□□□ 0.91
Pcdhb9E9Q5G2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.76■□□□□ 0.91
Pcdhb9E9Q5G2 Gm38027-201ENSMUST00000192315 235 ntBASIC20.76■□□□□ 0.91
Pcdhb9E9Q5G2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.76■□□□□ 0.91
Pcdhb9E9Q5G2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Pcdhb9E9Q5G2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb9E9Q5G2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb9E9Q5G2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb9E9Q5G2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb9E9Q5G2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb9E9Q5G2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.75■□□□□ 0.91
Pcdhb9E9Q5G2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.75■□□□□ 0.91
Pcdhb9E9Q5G2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.75■□□□□ 0.91
Pcdhb9E9Q5G2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.75■□□□□ 0.91
Pcdhb9E9Q5G2 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.75■□□□□ 0.91
Pcdhb9E9Q5G2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb9E9Q5G2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb9E9Q5G2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb9E9Q5G2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb9E9Q5G2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb9E9Q5G2 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.75■□□□□ 0.91
Pcdhb9E9Q5G2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb9E9Q5G2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb9E9Q5G2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb9E9Q5G2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb9E9Q5G2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Pcdhb9E9Q5G2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb9E9Q5G2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.74■□□□□ 0.91
Pcdhb9E9Q5G2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Pcdhb9E9Q5G2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.74■□□□□ 0.91
Pcdhb9E9Q5G2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb9E9Q5G2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb9E9Q5G2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb9E9Q5G2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb9E9Q5G2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Pcdhb9E9Q5G2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Pcdhb9E9Q5G2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb9E9Q5G2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb9E9Q5G2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb9E9Q5G2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb9E9Q5G2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb9E9Q5G2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.74■□□□□ 0.91
Pcdhb9E9Q5G2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb9E9Q5G2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb9E9Q5G2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb9E9Q5G2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.73■□□□□ 0.91
Pcdhb9E9Q5G2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms