Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc28a1E9PXX9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Slc28a1E9PXX9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc28a1E9PXX9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc28a1E9PXX9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Slc28a1E9PXX9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Slc28a1E9PXX9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc28a1E9PXX9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Slc28a1E9PXX9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc28a1E9PXX9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Slc28a1E9PXX9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc28a1E9PXX9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Slc28a1E9PXX9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Slc28a1E9PXX9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Slc28a1E9PXX9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc28a1E9PXX9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc28a1E9PXX9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc28a1E9PXX9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slc28a1E9PXX9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slc28a1E9PXX9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Slc28a1E9PXX9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.66■□□□□ 0.26
Slc28a1E9PXX9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc28a1E9PXX9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc28a1E9PXX9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.66■□□□□ 0.26
Slc28a1E9PXX9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Slc28a1E9PXX9 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.66■□□□□ 0.26
Slc28a1E9PXX9 Haglr-201ENSMUST00000100000 2085 ntBASIC16.66■□□□□ 0.26
Slc28a1E9PXX9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc28a1E9PXX9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc28a1E9PXX9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc28a1E9PXX9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc28a1E9PXX9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc28a1E9PXX9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc28a1E9PXX9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc28a1E9PXX9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Slc28a1E9PXX9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc28a1E9PXX9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc28a1E9PXX9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.65■□□□□ 0.26
Slc28a1E9PXX9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Slc28a1E9PXX9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc28a1E9PXX9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.65■□□□□ 0.26
Slc28a1E9PXX9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.65■□□□□ 0.26
Slc28a1E9PXX9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Slc28a1E9PXX9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc28a1E9PXX9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc28a1E9PXX9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.65■□□□□ 0.26
Slc28a1E9PXX9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc28a1E9PXX9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.65■□□□□ 0.26
Slc28a1E9PXX9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc28a1E9PXX9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc28a1E9PXX9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.65■□□□□ 0.26
Slc28a1E9PXX9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Slc28a1E9PXX9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Slc28a1E9PXX9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc28a1E9PXX9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Slc28a1E9PXX9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc28a1E9PXX9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc28a1E9PXX9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.64■□□□□ 0.25
Slc28a1E9PXX9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.64■□□□□ 0.25
Slc28a1E9PXX9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc28a1E9PXX9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc28a1E9PXX9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.64■□□□□ 0.25
Slc28a1E9PXX9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc28a1E9PXX9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.64■□□□□ 0.25
Slc28a1E9PXX9 Gm43017-201ENSMUST00000198296 752 ntBASIC16.64■□□□□ 0.25
Slc28a1E9PXX9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc28a1E9PXX9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Slc28a1E9PXX9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Slc28a1E9PXX9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.64■□□□□ 0.25
Slc28a1E9PXX9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc28a1E9PXX9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Slc28a1E9PXX9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc28a1E9PXX9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Slc28a1E9PXX9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc28a1E9PXX9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc28a1E9PXX9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc28a1E9PXX9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc28a1E9PXX9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.63■□□□□ 0.25
Slc28a1E9PXX9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc28a1E9PXX9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc28a1E9PXX9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc28a1E9PXX9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc28a1E9PXX9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc28a1E9PXX9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.63■□□□□ 0.25
Slc28a1E9PXX9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc28a1E9PXX9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc28a1E9PXX9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Slc28a1E9PXX9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc28a1E9PXX9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Slc28a1E9PXX9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Slc28a1E9PXX9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Slc28a1E9PXX9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc28a1E9PXX9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc28a1E9PXX9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Slc28a1E9PXX9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.62■□□□□ 0.25
Slc28a1E9PXX9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc28a1E9PXX9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Slc28a1E9PXX9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.62■□□□□ 0.25
Slc28a1E9PXX9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc28a1E9PXX9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms