Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col6a3E9PWQ3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.76■□□□□ 0.43
Col6a3E9PWQ3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.76■□□□□ 0.43
Col6a3E9PWQ3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col6a3E9PWQ3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Col6a3E9PWQ3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col6a3E9PWQ3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col6a3E9PWQ3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col6a3E9PWQ3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Col6a3E9PWQ3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col6a3E9PWQ3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.75■□□□□ 0.43
Col6a3E9PWQ3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col6a3E9PWQ3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.75■□□□□ 0.43
Col6a3E9PWQ3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.75■□□□□ 0.43
Col6a3E9PWQ3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.75■□□□□ 0.43
Col6a3E9PWQ3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col6a3E9PWQ3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col6a3E9PWQ3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Col6a3E9PWQ3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.74■□□□□ 0.43
Col6a3E9PWQ3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col6a3E9PWQ3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.74■□□□□ 0.43
Col6a3E9PWQ3 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.74■□□□□ 0.43
Col6a3E9PWQ3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col6a3E9PWQ3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.74■□□□□ 0.43
Col6a3E9PWQ3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Col6a3E9PWQ3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Col6a3E9PWQ3 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.74■□□□□ 0.43
Col6a3E9PWQ3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col6a3E9PWQ3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col6a3E9PWQ3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col6a3E9PWQ3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col6a3E9PWQ3 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col6a3E9PWQ3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col6a3E9PWQ3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.74■□□□□ 0.43
Col6a3E9PWQ3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col6a3E9PWQ3 Gm12260-201ENSMUST00000122447 411 ntBASIC17.74■□□□□ 0.43
Col6a3E9PWQ3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col6a3E9PWQ3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col6a3E9PWQ3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Col6a3E9PWQ3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Col6a3E9PWQ3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col6a3E9PWQ3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.73■□□□□ 0.43
Col6a3E9PWQ3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.73■□□□□ 0.43
Col6a3E9PWQ3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col6a3E9PWQ3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.73■□□□□ 0.43
Col6a3E9PWQ3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col6a3E9PWQ3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Col6a3E9PWQ3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col6a3E9PWQ3 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.73■□□□□ 0.43
Col6a3E9PWQ3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col6a3E9PWQ3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col6a3E9PWQ3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col6a3E9PWQ3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.73■□□□□ 0.43
Col6a3E9PWQ3 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.73■□□□□ 0.43
Col6a3E9PWQ3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col6a3E9PWQ3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col6a3E9PWQ3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col6a3E9PWQ3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col6a3E9PWQ3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.73■□□□□ 0.43
Col6a3E9PWQ3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col6a3E9PWQ3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col6a3E9PWQ3 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Col6a3E9PWQ3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col6a3E9PWQ3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col6a3E9PWQ3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col6a3E9PWQ3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Col6a3E9PWQ3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col6a3E9PWQ3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.72■□□□□ 0.43
Col6a3E9PWQ3 Gm14701-201ENSMUST00000117156 348 ntBASIC17.72■□□□□ 0.43
Col6a3E9PWQ3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.72■□□□□ 0.43
Col6a3E9PWQ3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col6a3E9PWQ3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col6a3E9PWQ3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col6a3E9PWQ3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col6a3E9PWQ3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.71■□□□□ 0.43
Col6a3E9PWQ3 Gm6296-201ENSMUST00000222599 943 ntBASIC17.71■□□□□ 0.43
Col6a3E9PWQ3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col6a3E9PWQ3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col6a3E9PWQ3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
Col6a3E9PWQ3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col6a3E9PWQ3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col6a3E9PWQ3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.71■□□□□ 0.43
Col6a3E9PWQ3 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.71■□□□□ 0.43
Col6a3E9PWQ3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col6a3E9PWQ3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col6a3E9PWQ3 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.42
Col6a3E9PWQ3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.71■□□□□ 0.42
Col6a3E9PWQ3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.71■□□□□ 0.42
Col6a3E9PWQ3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.71■□□□□ 0.42
Col6a3E9PWQ3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col6a3E9PWQ3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col6a3E9PWQ3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col6a3E9PWQ3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col6a3E9PWQ3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col6a3E9PWQ3 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.7■□□□□ 0.42
Col6a3E9PWQ3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Col6a3E9PWQ3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.7■□□□□ 0.42
Col6a3E9PWQ3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
Col6a3E9PWQ3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col6a3E9PWQ3 Gm14140-201ENSMUST00000119999 995 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms