Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm12918-201ENSMUST00000120234 636 ntBASIC17.71■□□□□ 0.43
Gm28043E0CXC2 Gm15710-201ENSMUST00000121821 636 ntBASIC17.71■□□□□ 0.43
Gm28043E0CXC2 Gm5075-201ENSMUST00000196916 622 ntBASIC17.71■□□□□ 0.43
Gm28043E0CXC2 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.71■□□□□ 0.43
Gm28043E0CXC2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.71■□□□□ 0.43
Gm28043E0CXC2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.71■□□□□ 0.43
Gm28043E0CXC2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.71■□□□□ 0.43
Gm28043E0CXC2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm28043E0CXC2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm28043E0CXC2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gm28043E0CXC2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gm28043E0CXC2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm28043E0CXC2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Gm28043E0CXC2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.7■□□□□ 0.42
Gm28043E0CXC2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Gm28043E0CXC2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm28043E0CXC2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm28043E0CXC2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm28043E0CXC2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Gm28043E0CXC2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
Gm28043E0CXC2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm28043E0CXC2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.7■□□□□ 0.42
Gm28043E0CXC2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm28043E0CXC2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm28043E0CXC2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm28043E0CXC2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm28043E0CXC2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm28043E0CXC2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm28043E0CXC2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Gm28043E0CXC2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28043E0CXC2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28043E0CXC2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Gm28043E0CXC2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28043E0CXC2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28043E0CXC2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28043E0CXC2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Gm28043E0CXC2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28043E0CXC2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Gm28043E0CXC2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.69■□□□□ 0.42
Gm28043E0CXC2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.69■□□□□ 0.42
Gm28043E0CXC2 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.69■□□□□ 0.42
Gm28043E0CXC2 Gm6365-201ENSMUST00000054711 744 ntBASIC17.69■□□□□ 0.42
Gm28043E0CXC2 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.69■□□□□ 0.42
Gm28043E0CXC2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28043E0CXC2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.69■□□□□ 0.42
Gm28043E0CXC2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Gm28043E0CXC2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28043E0CXC2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Gm28043E0CXC2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28043E0CXC2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.69■□□□□ 0.42
Gm28043E0CXC2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28043E0CXC2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28043E0CXC2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28043E0CXC2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Gm28043E0CXC2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28043E0CXC2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.68■□□□□ 0.42
Gm28043E0CXC2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28043E0CXC2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.68■□□□□ 0.42
Gm28043E0CXC2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.68■□□□□ 0.42
Gm28043E0CXC2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Gm28043E0CXC2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.68■□□□□ 0.42
Gm28043E0CXC2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.68■□□□□ 0.42
Gm28043E0CXC2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28043E0CXC2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28043E0CXC2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28043E0CXC2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28043E0CXC2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28043E0CXC2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28043E0CXC2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28043E0CXC2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Gm28043E0CXC2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28043E0CXC2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28043E0CXC2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28043E0CXC2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28043E0CXC2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.67■□□□□ 0.42
Gm28043E0CXC2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28043E0CXC2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28043E0CXC2 Gm12933-201ENSMUST00000120203 872 ntBASIC17.67■□□□□ 0.42
Gm28043E0CXC2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28043E0CXC2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28043E0CXC2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Gm28043E0CXC2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28043E0CXC2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28043E0CXC2 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.67■□□□□ 0.42
Gm28043E0CXC2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.67■□□□□ 0.42
Gm28043E0CXC2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28043E0CXC2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28043E0CXC2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.66■□□□□ 0.42
Gm28043E0CXC2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28043E0CXC2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28043E0CXC2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28043E0CXC2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28043E0CXC2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28043E0CXC2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28043E0CXC2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Gm28043E0CXC2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.66■□□□□ 0.42
Gm28043E0CXC2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28043E0CXC2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.66■□□□□ 0.42
Gm28043E0CXC2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28043E0CXC2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms