Protein–RNA interactions for Protein: C0HKE1

Hist1h2ab, Histone H2A type 1-B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2abC0HKE1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Hist1h2abC0HKE1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hist1h2abC0HKE1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hist1h2abC0HKE1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Hist1h2abC0HKE1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hist1h2abC0HKE1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
Hist1h2abC0HKE1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Hist1h2abC0HKE1 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.17■□□□□ 0.18
Hist1h2abC0HKE1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2abC0HKE1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2abC0HKE1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2abC0HKE1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.17■□□□□ 0.18
Hist1h2abC0HKE1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2abC0HKE1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2abC0HKE1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.17■□□□□ 0.18
Hist1h2abC0HKE1 Gm27405-201ENSMUST00000184201 112 ntBASIC16.17■□□□□ 0.18
Hist1h2abC0HKE1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.17■□□□□ 0.18
Hist1h2abC0HKE1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.17■□□□□ 0.18
Hist1h2abC0HKE1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2abC0HKE1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2abC0HKE1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2abC0HKE1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2abC0HKE1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Hist1h2abC0HKE1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
Hist1h2abC0HKE1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2abC0HKE1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Hist1h2abC0HKE1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hist1h2abC0HKE1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hist1h2abC0HKE1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hist1h2abC0HKE1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Hist1h2abC0HKE1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.16■□□□□ 0.18
Hist1h2abC0HKE1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.16■□□□□ 0.18
Hist1h2abC0HKE1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hist1h2abC0HKE1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hist1h2abC0HKE1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hist1h2abC0HKE1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hist1h2abC0HKE1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.16■□□□□ 0.18
Hist1h2abC0HKE1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hist1h2abC0HKE1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Hist1h2abC0HKE1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hist1h2abC0HKE1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hist1h2abC0HKE1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hist1h2abC0HKE1 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.15■□□□□ 0.18
Hist1h2abC0HKE1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hist1h2abC0HKE1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hist1h2abC0HKE1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Hist1h2abC0HKE1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Hist1h2abC0HKE1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hist1h2abC0HKE1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Hist1h2abC0HKE1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Hist1h2abC0HKE1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hist1h2abC0HKE1 Mir5133-201ENSMUST00000174955 77 ntBASIC16.15■□□□□ 0.18
Hist1h2abC0HKE1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hist1h2abC0HKE1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hist1h2abC0HKE1 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.15■□□□□ 0.18
Hist1h2abC0HKE1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hist1h2abC0HKE1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hist1h2abC0HKE1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hist1h2abC0HKE1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Hist1h2abC0HKE1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2abC0HKE1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2abC0HKE1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2abC0HKE1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Hist1h2abC0HKE1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.14■□□□□ 0.17
Hist1h2abC0HKE1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2abC0HKE1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Hist1h2abC0HKE1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2abC0HKE1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2abC0HKE1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2abC0HKE1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.14■□□□□ 0.17
Hist1h2abC0HKE1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2abC0HKE1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Hist1h2abC0HKE1 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.14■□□□□ 0.17
Hist1h2abC0HKE1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2abC0HKE1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Hist1h2abC0HKE1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2abC0HKE1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2abC0HKE1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Hist1h2abC0HKE1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2abC0HKE1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2abC0HKE1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2abC0HKE1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2abC0HKE1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2abC0HKE1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2abC0HKE1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2abC0HKE1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2abC0HKE1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2abC0HKE1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h2abC0HKE1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
Hist1h2abC0HKE1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h2abC0HKE1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h2abC0HKE1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h2abC0HKE1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.12■□□□□ 0.17
Hist1h2abC0HKE1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h2abC0HKE1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h2abC0HKE1 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.12■□□□□ 0.17
Hist1h2abC0HKE1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h2abC0HKE1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.12■□□□□ 0.17
Hist1h2abC0HKE1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h2abC0HKE1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms