Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm10231-201ENSMUST00000181584 441 ntBASIC17.31■□□□□ 0.36
Chd3B1AR17 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.31■□□□□ 0.36
Chd3B1AR17 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd3B1AR17 Gm10175-202ENSMUST00000208752 441 ntBASIC17.31■□□□□ 0.36
Chd3B1AR17 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd3B1AR17 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd3B1AR17 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Chd3B1AR17 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd3B1AR17 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd3B1AR17 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Chd3B1AR17 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd3B1AR17 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd3B1AR17 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd3B1AR17 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Chd3B1AR17 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chd3B1AR17 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd3B1AR17 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd3B1AR17 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chd3B1AR17 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.3■□□□□ 0.36
Chd3B1AR17 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chd3B1AR17 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd3B1AR17 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd3B1AR17 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Chd3B1AR17 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chd3B1AR17 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.29■□□□□ 0.36
Chd3B1AR17 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.29■□□□□ 0.36
Chd3B1AR17 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chd3B1AR17 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chd3B1AR17 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.29■□□□□ 0.36
Chd3B1AR17 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.29■□□□□ 0.36
Chd3B1AR17 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Chd3B1AR17 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Chd3B1AR17 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd3B1AR17 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd3B1AR17 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Chd3B1AR17 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd3B1AR17 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd3B1AR17 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd3B1AR17 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd3B1AR17 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chd3B1AR17 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.29■□□□□ 0.36
Chd3B1AR17 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd3B1AR17 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd3B1AR17 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Chd3B1AR17 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd3B1AR17 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Chd3B1AR17 Gm6659-201ENSMUST00000174752 547 ntBASIC17.28■□□□□ 0.36
Chd3B1AR17 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Chd3B1AR17 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd3B1AR17 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chd3B1AR17 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chd3B1AR17 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Chd3B1AR17 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd3B1AR17 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd3B1AR17 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chd3B1AR17 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chd3B1AR17 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd3B1AR17 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.28■□□□□ 0.36
Chd3B1AR17 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd3B1AR17 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd3B1AR17 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd3B1AR17 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.28■□□□□ 0.36
Chd3B1AR17 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd3B1AR17 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd3B1AR17 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd3B1AR17 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd3B1AR17 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd3B1AR17 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Chd3B1AR17 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chd3B1AR17 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd3B1AR17 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.27■□□□□ 0.36
Chd3B1AR17 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chd3B1AR17 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Chd3B1AR17 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd3B1AR17 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd3B1AR17 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Chd3B1AR17 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd3B1AR17 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Chd3B1AR17 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Chd3B1AR17 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd3B1AR17 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd3B1AR17 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd3B1AR17 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chd3B1AR17 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd3B1AR17 Gm37025-201ENSMUST00000195159 829 ntBASIC17.26■□□□□ 0.35
Chd3B1AR17 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.26■□□□□ 0.35
Chd3B1AR17 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.26■□□□□ 0.35
Chd3B1AR17 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd3B1AR17 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Chd3B1AR17 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd3B1AR17 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.26■□□□□ 0.35
Chd3B1AR17 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd3B1AR17 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd3B1AR17 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd3B1AR17 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd3B1AR17 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd3B1AR17 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Chd3B1AR17 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chd3B1AR17 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd3B1AR17 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms