Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.76■□□□□ 0.75
Scn3aA2ASI5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.76■□□□□ 0.75
Scn3aA2ASI5 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.76■□□□□ 0.75
Scn3aA2ASI5 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.76■□□□□ 0.75
Scn3aA2ASI5 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.76■□□□□ 0.75
Scn3aA2ASI5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn3aA2ASI5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn3aA2ASI5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn3aA2ASI5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn3aA2ASI5 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Scn3aA2ASI5 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn3aA2ASI5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn3aA2ASI5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Scn3aA2ASI5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn3aA2ASI5 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
Scn3aA2ASI5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.76■□□□□ 0.75
Scn3aA2ASI5 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn3aA2ASI5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn3aA2ASI5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.76■□□□□ 0.75
Scn3aA2ASI5 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn3aA2ASI5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.76■□□□□ 0.75
Scn3aA2ASI5 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.76■□□□□ 0.75
Scn3aA2ASI5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn3aA2ASI5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Scn3aA2ASI5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.75■□□□□ 0.75
Scn3aA2ASI5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn3aA2ASI5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn3aA2ASI5 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn3aA2ASI5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn3aA2ASI5 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn3aA2ASI5 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn3aA2ASI5 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn3aA2ASI5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.74■□□□□ 0.75
Scn3aA2ASI5 AA414768-201ENSMUST00000121924 1257 ntBASIC19.74■□□□□ 0.75
Scn3aA2ASI5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.74■□□□□ 0.75
Scn3aA2ASI5 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn3aA2ASI5 Gm10819-201ENSMUST00000099988 561 ntBASIC19.74■□□□□ 0.75
Scn3aA2ASI5 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Scn3aA2ASI5 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn3aA2ASI5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.74■□□□□ 0.75
Scn3aA2ASI5 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn3aA2ASI5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scn3aA2ASI5 Mir5130-201ENSMUST00000175160 84 ntBASIC19.74■□□□□ 0.75
Scn3aA2ASI5 Mir1668-201ENSMUST00000184114 107 ntBASIC19.74■□□□□ 0.75
Scn3aA2ASI5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn3aA2ASI5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn3aA2ASI5 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Scn3aA2ASI5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Scn3aA2ASI5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn3aA2ASI5 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn3aA2ASI5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn3aA2ASI5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Scn3aA2ASI5 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn3aA2ASI5 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn3aA2ASI5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn3aA2ASI5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn3aA2ASI5 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn3aA2ASI5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn3aA2ASI5 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn3aA2ASI5 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn3aA2ASI5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn3aA2ASI5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Scn3aA2ASI5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.72■□□□□ 0.75
Scn3aA2ASI5 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scn3aA2ASI5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scn3aA2ASI5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn3aA2ASI5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn3aA2ASI5 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.72■□□□□ 0.75
Scn3aA2ASI5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn3aA2ASI5 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn3aA2ASI5 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Scn3aA2ASI5 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Scn3aA2ASI5 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn3aA2ASI5 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn3aA2ASI5 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scn3aA2ASI5 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn3aA2ASI5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.72■□□□□ 0.75
Scn3aA2ASI5 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn3aA2ASI5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.71■□□□□ 0.75
Scn3aA2ASI5 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Scn3aA2ASI5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.71■□□□□ 0.75
Scn3aA2ASI5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.71■□□□□ 0.75
Scn3aA2ASI5 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.71■□□□□ 0.75
Scn3aA2ASI5 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.71■□□□□ 0.75
Scn3aA2ASI5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn3aA2ASI5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn3aA2ASI5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn3aA2ASI5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn3aA2ASI5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn3aA2ASI5 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn3aA2ASI5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.7■□□□□ 0.74
Scn3aA2ASI5 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn3aA2ASI5 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn3aA2ASI5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn3aA2ASI5 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn3aA2ASI5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn3aA2ASI5 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn3aA2ASI5 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn3aA2ASI5 Gm13474-201ENSMUST00000122466 815 ntBASIC19.7■□□□□ 0.74
Scn3aA2ASI5 Gm22697-201ENSMUST00000175194 63 ntBASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms