Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ubr4A2AN08 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Ubr4A2AN08 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC9.36□□□□□ -0.91
Ubr4A2AN08 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Ubr4A2AN08 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ubr4A2AN08 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ubr4A2AN08 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ubr4A2AN08 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
Ubr4A2AN08 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ubr4A2AN08 Gm15372-201ENSMUST00000120729 834 ntBASIC9.36□□□□□ -0.91
Ubr4A2AN08 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC9.36□□□□□ -0.91
Ubr4A2AN08 Gm18827-201ENSMUST00000188341 790 ntBASIC9.36□□□□□ -0.91
Ubr4A2AN08 H2-Pa-201ENSMUST00000182803 626 ntBASIC9.36□□□□□ -0.91
Ubr4A2AN08 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Ubr4A2AN08 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Ubr4A2AN08 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC9.36□□□□□ -0.91
Ubr4A2AN08 Gm8396-201ENSMUST00000057361 823 ntBASIC9.36□□□□□ -0.91
Ubr4A2AN08 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ubr4A2AN08 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Ubr4A2AN08 AC130829.1-201ENSMUST00000221548 494 ntBASIC9.35□□□□□ -0.91
Ubr4A2AN08 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Gm7593-201ENSMUST00000187246 644 ntBASIC9.35□□□□□ -0.91
Ubr4A2AN08 AC090659.1-201ENSMUST00000224334 768 ntBASIC9.35□□□□□ -0.91
Ubr4A2AN08 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ubr4A2AN08 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ubr4A2AN08 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Gm15173-201ENSMUST00000122049 433 ntBASIC9.35□□□□□ -0.91
Ubr4A2AN08 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC9.35□□□□□ -0.91
Ubr4A2AN08 Gm6089-201ENSMUST00000197666 938 ntBASIC9.35□□□□□ -0.91
Ubr4A2AN08 AC120002.2-201ENSMUST00000220205 773 ntBASIC9.35□□□□□ -0.91
Ubr4A2AN08 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC9.34□□□□□ -0.91
Ubr4A2AN08 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC9.34□□□□□ -0.91
Ubr4A2AN08 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ubr4A2AN08 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Ubr4A2AN08 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ubr4A2AN08 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC9.34□□□□□ -0.91
Ubr4A2AN08 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ubr4A2AN08 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ubr4A2AN08 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ubr4A2AN08 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ubr4A2AN08 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Ubr4A2AN08 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC9.34□□□□□ -0.91
Ubr4A2AN08 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ubr4A2AN08 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC9.34□□□□□ -0.91
Ubr4A2AN08 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Ubr4A2AN08 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Ubr4A2AN08 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC9.34□□□□□ -0.91
Ubr4A2AN08 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
Ubr4A2AN08 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC9.34□□□□□ -0.91
Ubr4A2AN08 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ubr4A2AN08 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ubr4A2AN08 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ubr4A2AN08 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ubr4A2AN08 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ubr4A2AN08 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
Ubr4A2AN08 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Ubr4A2AN08 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
Ubr4A2AN08 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ubr4A2AN08 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ubr4A2AN08 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ubr4A2AN08 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ubr4A2AN08 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ubr4A2AN08 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC9.33□□□□□ -0.92
Ubr4A2AN08 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ubr4A2AN08 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC9.33□□□□□ -0.92
Ubr4A2AN08 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ubr4A2AN08 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC9.33□□□□□ -0.92
Ubr4A2AN08 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Ubr4A2AN08 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ubr4A2AN08 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ubr4A2AN08 Gm13823-201ENSMUST00000119930 345 ntBASIC9.33□□□□□ -0.92
Ubr4A2AN08 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC9.33□□□□□ -0.92
Ubr4A2AN08 AA543401-201ENSMUST00000164248 1269 ntBASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms