Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-1A0N8R0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-1A0N8R0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-1A0N8R0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-1A0N8R0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-1A0N8R0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-1A0N8R0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-1A0N8R0 Gm6420-201ENSMUST00000193885 723 ntBASIC14.23□□□□□ -0.13
Trav12d-1A0N8R0 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.23□□□□□ -0.13
Trav12d-1A0N8R0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-1A0N8R0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-1A0N8R0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.23□□□□□ -0.13
Trav12d-1A0N8R0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav12d-1A0N8R0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-1A0N8R0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-1A0N8R0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-1A0N8R0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-1A0N8R0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-1A0N8R0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav12d-1A0N8R0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-1A0N8R0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-1A0N8R0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.22□□□□□ -0.13
Trav12d-1A0N8R0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12d-1A0N8R0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav12d-1A0N8R0 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.22□□□□□ -0.13
Trav12d-1A0N8R0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12d-1A0N8R0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav12d-1A0N8R0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Trav12d-1A0N8R0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav12d-1A0N8R0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav12d-1A0N8R0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12d-1A0N8R0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12d-1A0N8R0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12d-1A0N8R0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12d-1A0N8R0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-1A0N8R0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-1A0N8R0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-1A0N8R0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-1A0N8R0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-1A0N8R0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-1A0N8R0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-1A0N8R0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-1A0N8R0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-1A0N8R0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-1A0N8R0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-1A0N8R0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-1A0N8R0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-1A0N8R0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-1A0N8R0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-1A0N8R0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-1A0N8R0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-1A0N8R0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-1A0N8R0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-1A0N8R0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-1A0N8R0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.21□□□□□ -0.14
Trav12d-1A0N8R0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trav12d-1A0N8R0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-1A0N8R0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav12d-1A0N8R0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-1A0N8R0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-1A0N8R0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-1A0N8R0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-1A0N8R0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-1A0N8R0 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.2□□□□□ -0.14
Trav12d-1A0N8R0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav12d-1A0N8R0 Nespas-201ENSMUST00000143738 1083 ntBASIC14.2□□□□□ -0.14
Trav12d-1A0N8R0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
Trav12d-1A0N8R0 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.2□□□□□ -0.14
Trav12d-1A0N8R0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-1A0N8R0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-1A0N8R0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-1A0N8R0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav12d-1A0N8R0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-1A0N8R0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-1A0N8R0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-1A0N8R0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12d-1A0N8R0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12d-1A0N8R0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12d-1A0N8R0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12d-1A0N8R0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12d-1A0N8R0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav12d-1A0N8R0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12d-1A0N8R0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12d-1A0N8R0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12d-1A0N8R0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12d-1A0N8R0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav12d-1A0N8R0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.19□□□□□ -0.14
Trav12d-1A0N8R0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12d-1A0N8R0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav12d-1A0N8R0 Gm42778-201ENSMUST00000199644 553 ntBASIC14.19□□□□□ -0.14
Trav12d-1A0N8R0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12d-1A0N8R0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav12d-1A0N8R0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav12d-1A0N8R0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trav12d-1A0N8R0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav12d-1A0N8R0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12d-1A0N8R0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12d-1A0N8R0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12d-1A0N8R0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12d-1A0N8R0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms