Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Gm13534-201ENSMUST00000121169 513 ntBASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Gm21168-201ENSMUST00000199646 1096 ntBASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-4A0A0G2JFX3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Gm13234-201ENSMUST00000120010 747 ntBASIC12.16□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-4A0A0G2JFX3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC12.15□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms