Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.47■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Gm15378-201ENSMUST00000121894 207 ntBASIC21.47■■□□□ 1.03
Atg4a-psA0A0G2JFS9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Atg4a-psA0A0G2JFS9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.46■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Atg4a-psA0A0G2JFS9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC21.45■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Atg4a-psA0A0G2JFS9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC21.45■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.45■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Gm37519-201ENSMUST00000191687 2210 ntBASIC21.44■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Gm12382-201ENSMUST00000122005 922 ntBASIC21.43■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.43■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.43■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atg4a-psA0A0G2JFS9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC21.42■■□□□ 1.02
Atg4a-psA0A0G2JFS9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atg4a-psA0A0G2JFS9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Gm8520-201ENSMUST00000186517 868 ntBASIC21.41■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atg4a-psA0A0G2JFS9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Gm42900-201ENSMUST00000197184 2167 ntBASIC21.41■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Atg4a-psA0A0G2JFS9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms