Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3n-3A0A0G2JEM0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Gm7860-201ENSMUST00000121190 879 ntBASIC13.37□□□□□ -0.27
Trav3n-3A0A0G2JEM0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3n-3A0A0G2JEM0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.37□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav3n-3A0A0G2JEM0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.36□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Smad6-203ENSMUST00000179458 273 ntBASIC13.36□□□□□ -0.27
Trav3n-3A0A0G2JEM0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.36□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Gm13241-201ENSMUST00000094493 780 ntBASIC13.36□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3n-3A0A0G2JEM0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Wdr70-203ENSMUST00000227371 1130 ntBASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.35□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms