Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav19A0A0B4J1K4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav19A0A0B4J1K4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav19A0A0B4J1K4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav19A0A0B4J1K4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav19A0A0B4J1K4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav19A0A0B4J1K4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav19A0A0B4J1K4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav19A0A0B4J1K4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav19A0A0B4J1K4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav19A0A0B4J1K4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav19A0A0B4J1K4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav19A0A0B4J1K4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Trav19A0A0B4J1K4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav19A0A0B4J1K4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav19A0A0B4J1K4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav19A0A0B4J1K4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav19A0A0B4J1K4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav19A0A0B4J1K4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav19A0A0B4J1K4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav19A0A0B4J1K4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav19A0A0B4J1K4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav19A0A0B4J1K4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trav19A0A0B4J1K4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav19A0A0B4J1K4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav19A0A0B4J1K4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav19A0A0B4J1K4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav19A0A0B4J1K4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav19A0A0B4J1K4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav19A0A0B4J1K4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Trav19A0A0B4J1K4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav19A0A0B4J1K4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav19A0A0B4J1K4 Gm45417-201ENSMUST00000209533 758 ntBASIC13.22□□□□□ -0.29
Trav19A0A0B4J1K4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav19A0A0B4J1K4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav19A0A0B4J1K4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav19A0A0B4J1K4 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.22□□□□□ -0.29
Trav19A0A0B4J1K4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav19A0A0B4J1K4 Reep4-203ENSMUST00000226563 1444 ntBASIC13.22□□□□□ -0.29
Trav19A0A0B4J1K4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav19A0A0B4J1K4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav19A0A0B4J1K4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav19A0A0B4J1K4 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.21□□□□□ -0.29
Trav19A0A0B4J1K4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav19A0A0B4J1K4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav19A0A0B4J1K4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav19A0A0B4J1K4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
Trav19A0A0B4J1K4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav19A0A0B4J1K4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav19A0A0B4J1K4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav19A0A0B4J1K4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav19A0A0B4J1K4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav19A0A0B4J1K4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav19A0A0B4J1K4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav19A0A0B4J1K4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav19A0A0B4J1K4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav19A0A0B4J1K4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav19A0A0B4J1K4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.21□□□□□ -0.29
Trav19A0A0B4J1K4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav19A0A0B4J1K4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Trav19A0A0B4J1K4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav19A0A0B4J1K4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav19A0A0B4J1K4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav19A0A0B4J1K4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav19A0A0B4J1K4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav19A0A0B4J1K4 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.19□□□□□ -0.3
Trav19A0A0B4J1K4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav19A0A0B4J1K4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav19A0A0B4J1K4 Idnk-204ENSMUST00000226010 1898 ntBASIC13.19□□□□□ -0.3
Trav19A0A0B4J1K4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav19A0A0B4J1K4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav19A0A0B4J1K4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav19A0A0B4J1K4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms