Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav11A0A0B4J1J9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav11A0A0B4J1J9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav11A0A0B4J1J9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav11A0A0B4J1J9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav11A0A0B4J1J9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav11A0A0B4J1J9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav11A0A0B4J1J9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav11A0A0B4J1J9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav11A0A0B4J1J9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Trav11A0A0B4J1J9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trav11A0A0B4J1J9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav11A0A0B4J1J9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav11A0A0B4J1J9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav11A0A0B4J1J9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav11A0A0B4J1J9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav11A0A0B4J1J9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Trav11A0A0B4J1J9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav11A0A0B4J1J9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav11A0A0B4J1J9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav11A0A0B4J1J9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav11A0A0B4J1J9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trav11A0A0B4J1J9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
Trav11A0A0B4J1J9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.15□□□□□ -0.47
Trav11A0A0B4J1J9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav11A0A0B4J1J9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav11A0A0B4J1J9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav11A0A0B4J1J9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav11A0A0B4J1J9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav11A0A0B4J1J9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav11A0A0B4J1J9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav11A0A0B4J1J9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav11A0A0B4J1J9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav11A0A0B4J1J9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav11A0A0B4J1J9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav11A0A0B4J1J9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav11A0A0B4J1J9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav11A0A0B4J1J9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav11A0A0B4J1J9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav11A0A0B4J1J9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav11A0A0B4J1J9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav11A0A0B4J1J9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav11A0A0B4J1J9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav11A0A0B4J1J9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav11A0A0B4J1J9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
Trav11A0A0B4J1J9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav11A0A0B4J1J9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav11A0A0B4J1J9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav11A0A0B4J1J9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav11A0A0B4J1J9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav11A0A0B4J1J9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav11A0A0B4J1J9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav11A0A0B4J1J9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav11A0A0B4J1J9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav11A0A0B4J1J9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav11A0A0B4J1J9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Trav11A0A0B4J1J9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav11A0A0B4J1J9 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.13□□□□□ -0.47
Trav11A0A0B4J1J9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav11A0A0B4J1J9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav11A0A0B4J1J9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav11A0A0B4J1J9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav11A0A0B4J1J9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav11A0A0B4J1J9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Gm12821-201ENSMUST00000120022 600 ntBASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav11A0A0B4J1J9 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms