Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Gm27405-201ENSMUST00000184201 112 ntBASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Gm26524-201ENSMUST00000192339 390 ntBASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Zfp783-201ENSMUST00000095946 670 ntBASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trbv19A0A0B4J1H4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv19A0A0B4J1H4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv19A0A0B4J1H4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv19A0A0B4J1H4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv19A0A0B4J1H4 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.15□□□□□ -0.14
Trbv19A0A0B4J1H4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv19A0A0B4J1H4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.15□□□□□ -0.14
Trbv19A0A0B4J1H4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trbv19A0A0B4J1H4 Gm13148-201ENSMUST00000118892 745 ntBASIC14.15□□□□□ -0.14
Trbv19A0A0B4J1H4 Mir5133-201ENSMUST00000174955 77 ntBASIC14.15□□□□□ -0.14
Trbv19A0A0B4J1H4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.15□□□□□ -0.14
Trbv19A0A0B4J1H4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.15□□□□□ -0.14
Trbv19A0A0B4J1H4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv19A0A0B4J1H4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv19A0A0B4J1H4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv19A0A0B4J1H4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv19A0A0B4J1H4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv19A0A0B4J1H4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv19A0A0B4J1H4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv19A0A0B4J1H4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv19A0A0B4J1H4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv19A0A0B4J1H4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv19A0A0B4J1H4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trbv19A0A0B4J1H4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Flg-201ENSMUST00000050758 1488 ntBASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv19A0A0B4J1H4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv19A0A0B4J1H4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv19A0A0B4J1H4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms