Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv16A0A0B4J1H3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trbv16A0A0B4J1H3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv16A0A0B4J1H3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv16A0A0B4J1H3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv16A0A0B4J1H3 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.79□□□□□ -0.36
Trbv16A0A0B4J1H3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv16A0A0B4J1H3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.79□□□□□ -0.36
Trbv16A0A0B4J1H3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC12.79□□□□□ -0.36
Trbv16A0A0B4J1H3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv16A0A0B4J1H3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trbv16A0A0B4J1H3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv16A0A0B4J1H3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv16A0A0B4J1H3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv16A0A0B4J1H3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv16A0A0B4J1H3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv16A0A0B4J1H3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv16A0A0B4J1H3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv16A0A0B4J1H3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv16A0A0B4J1H3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv16A0A0B4J1H3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv16A0A0B4J1H3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Trbv16A0A0B4J1H3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv16A0A0B4J1H3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv16A0A0B4J1H3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv16A0A0B4J1H3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv16A0A0B4J1H3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv16A0A0B4J1H3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv16A0A0B4J1H3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv16A0A0B4J1H3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.77□□□□□ -0.36
Trbv16A0A0B4J1H3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv16A0A0B4J1H3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Trbv16A0A0B4J1H3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv16A0A0B4J1H3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv16A0A0B4J1H3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv16A0A0B4J1H3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv16A0A0B4J1H3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.77□□□□□ -0.37
Trbv16A0A0B4J1H3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trbv16A0A0B4J1H3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.77□□□□□ -0.37
Trbv16A0A0B4J1H3 Gm29791-202ENSMUST00000207888 369 ntBASIC12.77□□□□□ -0.37
Trbv16A0A0B4J1H3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv16A0A0B4J1H3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv16A0A0B4J1H3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv16A0A0B4J1H3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv16A0A0B4J1H3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv16A0A0B4J1H3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv16A0A0B4J1H3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv16A0A0B4J1H3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trbv16A0A0B4J1H3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv16A0A0B4J1H3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv16A0A0B4J1H3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms