Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv12-1A0A0B4J1H0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.56■□□□□ 0.08
Trbv12-1A0A0B4J1H0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.56■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.56■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Gm10812-201ENSMUST00000099864 546 ntBASIC15.56■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trbv12-1A0A0B4J1H0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.56■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.56■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.55■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.55■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.55■□□□□ 0.08
Trbv12-1A0A0B4J1H0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.55■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Gm24841-201ENSMUST00000158676 357 ntBASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trbv12-1A0A0B4J1H0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.53■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.53■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.53■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trbv12-1A0A0B4J1H0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.53■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.53■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.53■□□□□ 0.08
Trbv12-1A0A0B4J1H0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms