Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv3A0A0A6YYE2 Dancr-204ENSMUST00000132389 2347 ntBASIC13.63□□□□□ -0.23
Trbv3A0A0A6YYE2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv3A0A0A6YYE2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trbv3A0A0A6YYE2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv3A0A0A6YYE2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv3A0A0A6YYE2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv3A0A0A6YYE2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv3A0A0A6YYE2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv3A0A0A6YYE2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.61□□□□□ -0.23
Trbv3A0A0A6YYE2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv3A0A0A6YYE2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv3A0A0A6YYE2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv3A0A0A6YYE2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv3A0A0A6YYE2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trbv3A0A0A6YYE2 Gm43137-201ENSMUST00000198052 594 ntBASIC13.61□□□□□ -0.23
Trbv3A0A0A6YYE2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv3A0A0A6YYE2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv3A0A0A6YYE2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv3A0A0A6YYE2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv3A0A0A6YYE2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv3A0A0A6YYE2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv3A0A0A6YYE2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trbv3A0A0A6YYE2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv3A0A0A6YYE2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv3A0A0A6YYE2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv3A0A0A6YYE2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.61□□□□□ -0.23
Trbv3A0A0A6YYE2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv3A0A0A6YYE2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Gm15546-201ENSMUST00000122095 826 ntBASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv3A0A0A6YYE2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv3A0A0A6YYE2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv3A0A0A6YYE2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv3A0A0A6YYE2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv3A0A0A6YYE2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv3A0A0A6YYE2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv3A0A0A6YYE2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv3A0A0A6YYE2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv3A0A0A6YYE2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv3A0A0A6YYE2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.59□□□□□ -0.23
Trbv3A0A0A6YYE2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms