Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ighv1-42A0A0A6YY38 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-42A0A0A6YY38 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-42A0A0A6YY38 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-42A0A0A6YY38 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ighv1-42A0A0A6YY38 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ighv1-42A0A0A6YY38 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ighv1-42A0A0A6YY38 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-42A0A0A6YY38 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-42A0A0A6YY38 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.3■□□□□ 0.2
Ighv1-42A0A0A6YY38 Gm10013-201ENSMUST00000106074 672 ntBASIC16.3■□□□□ 0.2
Ighv1-42A0A0A6YY38 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.3■□□□□ 0.2
Ighv1-42A0A0A6YY38 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-42A0A0A6YY38 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-42A0A0A6YY38 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-42A0A0A6YY38 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Ighv1-42A0A0A6YY38 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ighv1-42A0A0A6YY38 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ighv1-42A0A0A6YY38 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-42A0A0A6YY38 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.3■□□□□ 0.2
Ighv1-42A0A0A6YY38 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-42A0A0A6YY38 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-42A0A0A6YY38 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-42A0A0A6YY38 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-42A0A0A6YY38 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-42A0A0A6YY38 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-42A0A0A6YY38 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-42A0A0A6YY38 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-42A0A0A6YY38 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-42A0A0A6YY38 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-42A0A0A6YY38 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-42A0A0A6YY38 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-42A0A0A6YY38 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-42A0A0A6YY38 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-42A0A0A6YY38 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-42A0A0A6YY38 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-42A0A0A6YY38 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-42A0A0A6YY38 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-42A0A0A6YY38 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ighv1-42A0A0A6YY38 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Ighv1-42A0A0A6YY38 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ighv1-42A0A0A6YY38 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-42A0A0A6YY38 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Ighv1-42A0A0A6YY38 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ighv1-42A0A0A6YY38 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-42A0A0A6YY38 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-42A0A0A6YY38 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-42A0A0A6YY38 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-42A0A0A6YY38 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.28■□□□□ 0.2
Ighv1-42A0A0A6YY38 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-42A0A0A6YY38 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-42A0A0A6YY38 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.28■□□□□ 0.2
Ighv1-42A0A0A6YY38 Gm7791-201ENSMUST00000219066 539 ntBASIC16.28■□□□□ 0.2
Ighv1-42A0A0A6YY38 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.28■□□□□ 0.2
Ighv1-42A0A0A6YY38 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ighv1-42A0A0A6YY38 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-42A0A0A6YY38 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ighv1-42A0A0A6YY38 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.28■□□□□ 0.2
Ighv1-42A0A0A6YY38 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-42A0A0A6YY38 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-42A0A0A6YY38 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-42A0A0A6YY38 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ighv1-42A0A0A6YY38 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.28■□□□□ 0.2
Ighv1-42A0A0A6YY38 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
Ighv1-42A0A0A6YY38 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-42A0A0A6YY38 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-42A0A0A6YY38 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-42A0A0A6YY38 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-42A0A0A6YY38 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-42A0A0A6YY38 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-42A0A0A6YY38 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-42A0A0A6YY38 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-42A0A0A6YY38 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ighv1-42A0A0A6YY38 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.27■□□□□ 0.2
Ighv1-42A0A0A6YY38 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Ighv1-42A0A0A6YY38 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.27■□□□□ 0.2
Ighv1-42A0A0A6YY38 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.27■□□□□ 0.2
Ighv1-42A0A0A6YY38 Gm16061-201ENSMUST00000122167 857 ntBASIC16.27■□□□□ 0.2
Ighv1-42A0A0A6YY38 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-42A0A0A6YY38 Gm37025-201ENSMUST00000195159 829 ntBASIC16.27■□□□□ 0.2
Ighv1-42A0A0A6YY38 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.27■□□□□ 0.2
Ighv1-42A0A0A6YY38 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-42A0A0A6YY38 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-42A0A0A6YY38 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-42A0A0A6YY38 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Ighv1-42A0A0A6YY38 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-42A0A0A6YY38 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Ighv1-42A0A0A6YY38 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ighv1-42A0A0A6YY38 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ighv1-42A0A0A6YY38 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.26■□□□□ 0.19
Ighv1-42A0A0A6YY38 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-42A0A0A6YY38 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-42A0A0A6YY38 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-42A0A0A6YY38 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ighv1-42A0A0A6YY38 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-42A0A0A6YY38 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-42A0A0A6YY38 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-42A0A0A6YY38 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-42A0A0A6YY38 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.26■□□□□ 0.19
Ighv1-42A0A0A6YY38 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms