Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC12.19□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.17□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav13-4-dv7A0A075B6C2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms