Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav17A0A075B655 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.06□□□□□ -0.16
Trav17A0A075B655 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav17A0A075B655 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav17A0A075B655 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav17A0A075B655 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav17A0A075B655 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav17A0A075B655 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
Trav17A0A075B655 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav17A0A075B655 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav17A0A075B655 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav17A0A075B655 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav17A0A075B655 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav17A0A075B655 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav17A0A075B655 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav17A0A075B655 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav17A0A075B655 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav17A0A075B655 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav17A0A075B655 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav17A0A075B655 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav17A0A075B655 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Trav17A0A075B655 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.06□□□□□ -0.16
Trav17A0A075B655 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav17A0A075B655 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Trav17A0A075B655 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav17A0A075B655 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav17A0A075B655 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav17A0A075B655 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav17A0A075B655 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav17A0A075B655 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav17A0A075B655 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav17A0A075B655 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav17A0A075B655 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav17A0A075B655 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav17A0A075B655 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav17A0A075B655 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav17A0A075B655 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav17A0A075B655 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav17A0A075B655 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav17A0A075B655 Idnk-204ENSMUST00000226010 1898 ntBASIC14.05□□□□□ -0.16
Trav17A0A075B655 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav17A0A075B655 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav17A0A075B655 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav17A0A075B655 Reep4-203ENSMUST00000226563 1444 ntBASIC14.05□□□□□ -0.16
Trav17A0A075B655 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav17A0A075B655 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav17A0A075B655 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav17A0A075B655 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav17A0A075B655 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav17A0A075B655 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav17A0A075B655 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav17A0A075B655 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav17A0A075B655 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Trav17A0A075B655 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav17A0A075B655 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav17A0A075B655 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.04□□□□□ -0.16
Trav17A0A075B655 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav17A0A075B655 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav17A0A075B655 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav17A0A075B655 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav17A0A075B655 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav17A0A075B655 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav17A0A075B655 Gm45417-201ENSMUST00000209533 758 ntBASIC14.04□□□□□ -0.16
Trav17A0A075B655 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav17A0A075B655 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav17A0A075B655 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.04□□□□□ -0.16
Trav17A0A075B655 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav17A0A075B655 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav17A0A075B655 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav17A0A075B655 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav17A0A075B655 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.04□□□□□ -0.16
Trav17A0A075B655 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav17A0A075B655 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav17A0A075B655 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav17A0A075B655 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav17A0A075B655 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav17A0A075B655 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav17A0A075B655 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav17A0A075B655 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav17A0A075B655 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav17A0A075B655 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav17A0A075B655 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav17A0A075B655 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav17A0A075B655 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav17A0A075B655 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav17A0A075B655 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trav17A0A075B655 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav17A0A075B655 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav17A0A075B655 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav17A0A075B655 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav17A0A075B655 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav17A0A075B655 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav17A0A075B655 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.03□□□□□ -0.16
Trav17A0A075B655 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav17A0A075B655 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav17A0A075B655 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav17A0A075B655 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav17A0A075B655 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav17A0A075B655 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav17A0A075B655 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms