Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm12918-201ENSMUST00000120234 636 ntBASIC14.73□□□□□ -0.05
Trav5-4A0A075B652 Gm15710-201ENSMUST00000121821 636 ntBASIC14.73□□□□□ -0.05
Trav5-4A0A075B652 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-4A0A075B652 Gm5075-201ENSMUST00000196916 622 ntBASIC14.73□□□□□ -0.05
Trav5-4A0A075B652 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.73□□□□□ -0.05
Trav5-4A0A075B652 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.73□□□□□ -0.05
Trav5-4A0A075B652 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.73□□□□□ -0.05
Trav5-4A0A075B652 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-4A0A075B652 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-4A0A075B652 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-4A0A075B652 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.73□□□□□ -0.05
Trav5-4A0A075B652 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-4A0A075B652 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-4A0A075B652 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-4A0A075B652 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav5-4A0A075B652 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-4A0A075B652 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-4A0A075B652 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav5-4A0A075B652 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-4A0A075B652 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav5-4A0A075B652 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav5-4A0A075B652 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-4A0A075B652 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-4A0A075B652 Gm6211-202ENSMUST00000167849 925 ntBASIC14.72□□□□□ -0.05
Trav5-4A0A075B652 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-4A0A075B652 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-4A0A075B652 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-4A0A075B652 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-4A0A075B652 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-4A0A075B652 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-4A0A075B652 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-4A0A075B652 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-4A0A075B652 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.72□□□□□ -0.05
Trav5-4A0A075B652 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-4A0A075B652 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-4A0A075B652 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-4A0A075B652 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav5-4A0A075B652 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5-4A0A075B652 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5-4A0A075B652 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Trav5-4A0A075B652 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5-4A0A075B652 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.71□□□□□ -0.05
Trav5-4A0A075B652 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5-4A0A075B652 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5-4A0A075B652 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav5-4A0A075B652 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.71□□□□□ -0.06
Trav5-4A0A075B652 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav5-4A0A075B652 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav5-4A0A075B652 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav5-4A0A075B652 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav5-4A0A075B652 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-4A0A075B652 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-4A0A075B652 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-4A0A075B652 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-4A0A075B652 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-4A0A075B652 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.69□□□□□ -0.06
Trav5-4A0A075B652 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-4A0A075B652 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav5-4A0A075B652 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-4A0A075B652 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.69□□□□□ -0.06
Trav5-4A0A075B652 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-4A0A075B652 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-4A0A075B652 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav5-4A0A075B652 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav5-4A0A075B652 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-4A0A075B652 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-4A0A075B652 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-4A0A075B652 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-4A0A075B652 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-4A0A075B652 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-4A0A075B652 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav5-4A0A075B652 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-4A0A075B652 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-4A0A075B652 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms